Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.46■□□□□ 0.39
RIPK2O43353 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.46■□□□□ 0.39
RIPK2O43353 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.46■□□□□ 0.39
RIPK2O43353 AC122714.2-201ENST00000502787 707 ntBASIC17.46■□□□□ 0.39
RIPK2O43353 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.46■□□□□ 0.39
RIPK2O43353 AP002490.2-201ENST00000524791 560 ntBASIC17.46■□□□□ 0.39
RIPK2O43353 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.46■□□□□ 0.39
RIPK2O43353 AC005332.3-201ENST00000589904 676 ntBASIC17.46■□□□□ 0.39
RIPK2O43353 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RIPK2O43353 AL390719.2-201ENST00000606993 987 ntBASIC17.46■□□□□ 0.39
RIPK2O43353 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.46■□□□□ 0.39
RIPK2O43353 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.46■□□□□ 0.39
RIPK2O43353 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RIPK2O43353 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 AC024909.3-201ENST00000611513 2257 ntBASIC17.46■□□□□ 0.39
RIPK2O43353 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.46■□□□□ 0.39
RIPK2O43353 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIPK2O43353 KRT8P10-201ENST00000450021 1447 ntBASIC17.46■□□□□ 0.39
RIPK2O43353 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
RIPK2O43353 KRT18P22-201ENST00000402024 1347 ntBASIC17.46■□□□□ 0.38
RIPK2O43353 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
RIPK2O43353 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RIPK2O43353 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.45■□□□□ 0.38
RIPK2O43353 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RIPK2O43353 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.45■□□□□ 0.38
RIPK2O43353 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RIPK2O43353 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.45■□□□□ 0.38
RIPK2O43353 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RIPK2O43353 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.45■□□□□ 0.38
RIPK2O43353 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RIPK2O43353 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 AC111152.3-201ENST00000569699 673 ntBASIC17.45■□□□□ 0.38
RIPK2O43353 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RIPK2O43353 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIPK2O43353 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RIPK2O43353 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.44■□□□□ 0.38
RIPK2O43353 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RIPK2O43353 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.44■□□□□ 0.38
RIPK2O43353 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RIPK2O43353 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RIPK2O43353 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.44■□□□□ 0.38
RIPK2O43353 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.44■□□□□ 0.38
RIPK2O43353 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.44■□□□□ 0.38
RIPK2O43353 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.44■□□□□ 0.38
RIPK2O43353 MIR4497-201ENST00000583208 89 ntBASIC17.44■□□□□ 0.38
RIPK2O43353 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.44■□□□□ 0.38
RIPK2O43353 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 AL031432.5-201ENST00000641059 760 ntBASIC17.44■□□□□ 0.38
RIPK2O43353 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.44■□□□□ 0.38
RIPK2O43353 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.44■□□□□ 0.38
RIPK2O43353 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIPK2O43353 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.44■□□□□ 0.38
RIPK2O43353 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms