Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PFDN6O15212 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PFDN6O15212 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.23■□□□□ 0.35
PFDN6O15212 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PFDN6O15212 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.23■□□□□ 0.35
PFDN6O15212 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PFDN6O15212 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PFDN6O15212 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.23■□□□□ 0.35
PFDN6O15212 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PFDN6O15212 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.23■□□□□ 0.35
PFDN6O15212 MIR3652-201ENST00000579335 131 ntBASIC17.23■□□□□ 0.35
PFDN6O15212 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.23■□□□□ 0.35
PFDN6O15212 AP000867.4-201ENST00000641616 219 ntBASIC17.23■□□□□ 0.35
PFDN6O15212 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PFDN6O15212 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
PFDN6O15212 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PFDN6O15212 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PFDN6O15212 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PFDN6O15212 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PFDN6O15212 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.23■□□□□ 0.35
PFDN6O15212 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PFDN6O15212 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PFDN6O15212 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
PFDN6O15212 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PFDN6O15212 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PFDN6O15212 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
PFDN6O15212 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
PFDN6O15212 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PFDN6O15212 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.22■□□□□ 0.35
PFDN6O15212 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 NUS1P1-201ENST00000446295 882 ntBASIC17.22■□□□□ 0.35
PFDN6O15212 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.22■□□□□ 0.35
PFDN6O15212 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.22■□□□□ 0.35
PFDN6O15212 AC138894.3-201ENST00000603787 634 ntBASIC17.22■□□□□ 0.35
PFDN6O15212 AL121772.3-201ENST00000610840 674 ntBASIC17.22■□□□□ 0.35
PFDN6O15212 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.22■□□□□ 0.35
PFDN6O15212 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.22■□□□□ 0.35
PFDN6O15212 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.22■□□□□ 0.35
PFDN6O15212 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.22■□□□□ 0.35
PFDN6O15212 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.22■□□□□ 0.35
PFDN6O15212 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.22■□□□□ 0.35
PFDN6O15212 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PFDN6O15212 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PFDN6O15212 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.21■□□□□ 0.35
PFDN6O15212 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.21■□□□□ 0.35
PFDN6O15212 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PFDN6O15212 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PFDN6O15212 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PFDN6O15212 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PFDN6O15212 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 HCG4P8-203ENST00000443049 980 ntBASIC17.21■□□□□ 0.35
PFDN6O15212 LINC01711-201ENST00000598340 967 ntBASIC17.21■□□□□ 0.35
PFDN6O15212 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.21■□□□□ 0.35
PFDN6O15212 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
PFDN6O15212 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.21■□□□□ 0.35
PFDN6O15212 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PFDN6O15212 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PFDN6O15212 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PFDN6O15212 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PFDN6O15212 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PFDN6O15212 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PFDN6O15212 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
PFDN6O15212 SIGLEC16-201ENST00000599858 1437 ntBASIC17.21■□□□□ 0.34
PFDN6O15212 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PFDN6O15212 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PFDN6O15212 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.2■□□□□ 0.34
PFDN6O15212 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.2■□□□□ 0.34
PFDN6O15212 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PFDN6O15212 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN6O15212 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PFDN6O15212 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN6O15212 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN6O15212 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms