Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CHD1O14646 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CHD1O14646 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
CHD1O14646 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC27.28■■□□□ 1.96
CHD1O14646 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD1O14646 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CHD1O14646 NSL1-201ENST00000366976 722 ntTSL 2 BASIC27.27■■□□□ 1.96
CHD1O14646 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC27.27■■□□□ 1.96
CHD1O14646 ELK2AP-201ENST00000392510 1007 ntBASIC27.27■■□□□ 1.96
CHD1O14646 EMC4-209ENST00000559421 497 ntTSL 2 BASIC27.27■■□□□ 1.96
CHD1O14646 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD1O14646 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD1O14646 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC27.27■■□□□ 1.96
CHD1O14646 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC27.27■■□□□ 1.96
CHD1O14646 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD1O14646 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC27.27■■□□□ 1.96
CHD1O14646 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
CHD1O14646 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC27.27■■□□□ 1.96
CHD1O14646 AC103810.3-201ENST00000583567 96 ntBASIC27.27■■□□□ 1.96
CHD1O14646 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC27.27■■□□□ 1.96
CHD1O14646 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC27.27■■□□□ 1.96
CHD1O14646 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
CHD1O14646 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHD1O14646 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1O14646 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
CHD1O14646 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
CHD1O14646 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1O14646 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1O14646 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1O14646 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1O14646 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1O14646 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
CHD1O14646 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC27.26■■□□□ 1.95
CHD1O14646 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC27.26■■□□□ 1.95
CHD1O14646 CYP2A7P1-201ENST00000595391 815 ntBASIC27.26■■□□□ 1.95
CHD1O14646 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1O14646 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC27.26■■□□□ 1.95
CHD1O14646 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1O14646 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1O14646 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1O14646 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CHD1O14646 NOC2LP1-202ENST00000452600 2235 ntBASIC27.26■■□□□ 1.95
CHD1O14646 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
CHD1O14646 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC27.25■■□□□ 1.95
CHD1O14646 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1O14646 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1O14646 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1O14646 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1O14646 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1O14646 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
CHD1O14646 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC27.25■■□□□ 1.95
CHD1O14646 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC27.25■■□□□ 1.95
CHD1O14646 AC021097.1-201ENST00000607902 574 ntBASIC27.25■■□□□ 1.95
CHD1O14646 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
CHD1O14646 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC27.25■■□□□ 1.95
CHD1O14646 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CHD1O14646 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC27.25■■□□□ 1.95
CHD1O14646 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CHD1O14646 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC27.24■■□□□ 1.95
CHD1O14646 AGER-214ENST00000538695 487 ntTSL 2 BASIC27.24■■□□□ 1.95
CHD1O14646 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC27.24■■□□□ 1.95
CHD1O14646 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC27.24■■□□□ 1.95
CHD1O14646 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC27.24■■□□□ 1.95
CHD1O14646 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
CHD1O14646 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC27.24■■□□□ 1.95
CHD1O14646 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CHD1O14646 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHD1O14646 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHD1O14646 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC27.23■■□□□ 1.95
CHD1O14646 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC27.23■■□□□ 1.95
CHD1O14646 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC27.23■■□□□ 1.95
CHD1O14646 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC27.23■■□□□ 1.95
CHD1O14646 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHD1O14646 AC005229.1-201ENST00000392885 409 ntBASIC27.23■■□□□ 1.95
CHD1O14646 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CHD1O14646 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC27.23■■□□□ 1.95
CHD1O14646 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC27.23■■□□□ 1.95
CHD1O14646 RN7SL190P-201ENST00000582519 257 ntBASIC27.23■■□□□ 1.95
CHD1O14646 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
CHD1O14646 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC27.23■■□□□ 1.95
CHD1O14646 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CHD1O14646 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CHD1O14646 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC27.22■■□□□ 1.95
CHD1O14646 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CHD1O14646 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CHD1O14646 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC27.22■■□□□ 1.95
CHD1O14646 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms