Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 AC124067.4-201ENST00000519691 2379 ntBASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CYP46A1Q9Y6A2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 AC004817.3-201ENST00000602957 2129 ntBASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYP46A1Q9Y6A2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 UPK3BP1-201ENST00000428678 509 ntBASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 AC132008.2-207ENST00000454517 770 ntBASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 RNF216P1-203ENST00000404404 2427 ntBASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.38■□□□□ 0.85
CYP46A1Q9Y6A2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 AP005117.1-201ENST00000584346 1413 ntBASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 FOSL1P1-201ENST00000511041 816 ntBASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 AP001269.4-201ENST00000609611 512 ntBASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.37■□□□□ 0.85
CYP46A1Q9Y6A2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP46A1Q9Y6A2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms