Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 APRT-205ENST00000564858 584 ntTSL 233.6■■■□□ 2.975e-8■□□□□ 9.2
DROSHAQ9NRR4 APRT-203ENST00000562464 515 ntTSL 330.02■■■□□ 2.45e-8■□□□□ 9.2
DROSHAQ9NRR4 APRT-211ENST00000569616 788 ntTSL 525.85■■□□□ 1.735e-8■□□□□ 9.2
DROSHAQ9NRR4 APRT-204ENST00000563655 709 ntTSL 5 BASIC23.44■■□□□ 1.345e-8■□□□□ 9.2
DROSHAQ9NRR4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.155e-8■□□□□ 9.2
DROSHAQ9NRR4 APRT-207ENST00000567391 667 ntTSL 322.26■■□□□ 1.155e-8■□□□□ 9.2
DROSHAQ9NRR4 APRT-209ENST00000568319 542 ntTSL 319.76■□□□□ 0.755e-8■□□□□ 9.2
DROSHAQ9NRR4 APRT-202ENST00000426324 664 ntTSL 2 BASIC18.94■□□□□ 0.625e-8■□□□□ 9.2
DROSHAQ9NRR4 APRT-208ENST00000567713 470 ntTSL 517.88■□□□□ 0.455e-8■□□□□ 9.2
DROSHAQ9NRR4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.112e-7■□□□□ 9.2
DROSHAQ9NRR4 FBXW4P1-201ENST00000426721 2239 ntBASIC31.41■■■□□ 2.622e-7■□□□□ 9.2
DROSHAQ9NRR4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC29.39■■■□□ 2.292e-7■□□□□ 9.2
DROSHAQ9NRR4 HIST1H2AC-201ENST00000314088 1668 ntTSL 1 (best)25.69■■□□□ 1.72e-19■□□□□ 9.2
DROSHAQ9NRR4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.62e-19■□□□□ 9.2
DROSHAQ9NRR4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.432e-19■□□□□ 9.2
DROSHAQ9NRR4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC22.87■■□□□ 1.252e-7■□□□□ 9.2
DROSHAQ9NRR4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC22.54■■□□□ 1.22e-7■□□□□ 9.2
DROSHAQ9NRR4 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC20.88■□□□□ 0.932e-7■□□□□ 9.2
DROSHAQ9NRR4 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.372e-7■□□□□ 9.2
DROSHAQ9NRR4 UFD1-206ENST00000466373 3059 ntTSL 214.94□□□□□ -0.022e-7■□□□□ 9.2
DROSHAQ9NRR4 SNHG12-204ENST00000464612 719 ntTSL 1 (best)13.73□□□□□ -0.212e-7■□□□□ 9.2
DROSHAQ9NRR4 UFD1-205ENST00000459854 5038 ntTSL 1 (best)12.9□□□□□ -0.342e-7■□□□□ 9.2
DROSHAQ9NRR4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.42□□□□□ -1.222e-7■□□□□ 9.2
DROSHAQ9NRR4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.443e-22■□□□□ 9.2
DROSHAQ9NRR4 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.93e-22■□□□□ 9.2
DROSHAQ9NRR4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.499e-9■□□□□ 9.2
DROSHAQ9NRR4 MCM3AP-203ENST00000426537 876 ntTSL 233.7■■■□□ 2.982e-6■□□□□ 9.2
DROSHAQ9NRR4 CCND1-206ENST00000545484 430 ntTSL 532.95■■■□□ 2.862e-6■□□□□ 9.2
DROSHAQ9NRR4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC25.69■■□□□ 1.72e-6■□□□□ 9.2
DROSHAQ9NRR4 MCM3AP-209ENST00000495475 199 ntTSL 318.02■□□□□ 0.472e-6■□□□□ 9.2
DROSHAQ9NRR4 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.022e-6■□□□□ 9.2
DROSHAQ9NRR4 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.52e-6■□□□□ 9.2
DROSHAQ9NRR4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.892e-8■□□□□ 9.2
DROSHAQ9NRR4 PTP4A1-202ENST00000470661 479 ntTSL 210.16□□□□□ -0.782e-8■□□□□ 9.2
DROSHAQ9NRR4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.16□□□□□ -2.062e-8■□□□□ 9.2
DROSHAQ9NRR4 MVD-203ENST00000562651 908 ntTSL 231.24■■■□□ 2.593e-6■□□□□ 9.2
DROSHAQ9NRR4 MVD-213ENST00000566636 863 ntTSL 330.55■■■□□ 2.483e-6■□□□□ 9.2
DROSHAQ9NRR4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC23.34■■□□□ 1.333e-13■□□□□ 9.2
DROSHAQ9NRR4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.839e-9■□□□□ 9.2
DROSHAQ9NRR4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.839e-9■□□□□ 9.2
DROSHAQ9NRR4 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.629e-9■□□□□ 9.2
DROSHAQ9NRR4 RNF220-207ENST00000470498 594 ntTSL 37.45□□□□□ -1.229e-9■□□□□ 9.2
DROSHAQ9NRR4 LCAT-208ENST00000575467 842 ntTSL 529.69■■■□□ 2.349e-8■□□□□ 9.1
DROSHAQ9NRR4 LCAT-204ENST00000570980 1240 ntTSL 228.97■■■□□ 2.239e-8■□□□□ 9.1
DROSHAQ9NRR4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.949e-8■□□□□ 9.1
DROSHAQ9NRR4 RPS7-205ENST00000462576 907 ntTSL 1 (best)41.45■■■■■ 4.235e-12■□□□□ 9.1
DROSHAQ9NRR4 PMS2P3-205ENST00000437568 1185 ntTSL 538.64■■■■□ 3.783e-8■□□□□ 9.1
DROSHAQ9NRR4 PMS2P3-202ENST00000418756 1490 ntTSL 335.67■■■■□ 3.33e-8■□□□□ 9.1
DROSHAQ9NRR4 PMS2P3-201ENST00000394921 1316 ntTSL 235.45■■■■□ 3.273e-8■□□□□ 9.1
DROSHAQ9NRR4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC34.63■■■■□ 3.133e-8■□□□□ 9.1
DROSHAQ9NRR4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.495e-12■□□□□ 9.1
DROSHAQ9NRR4 CHCHD10-203ENST00000517886 494 ntTSL 330.63■■■□□ 2.495e-12■□□□□ 9.1
DROSHAQ9NRR4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC29.96■■■□□ 2.395e-12■□□□□ 9.1
DROSHAQ9NRR4 PMS2P3-204ENST00000430602 1005 ntTSL 226.32■■□□□ 1.83e-8■□□□□ 9.1
DROSHAQ9NRR4 API5-211ENST00000534695 560 ntTSL 5 BASIC24.45■■□□□ 1.53e-8■□□□□ 9.1
DROSHAQ9NRR4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.463e-8■□□□□ 9.1
DROSHAQ9NRR4 API5-207ENST00000530300 553 ntTSL 223.99■■□□□ 1.433e-8■□□□□ 9.1
DROSHAQ9NRR4 RIPOR3-203ENST00000462493 2698 ntTSL 223.16■■□□□ 1.35e-6■□□□□ 9.1
DROSHAQ9NRR4 API5-202ENST00000420461 2009 ntTSL 2 BASIC23.06■■□□□ 1.283e-8■□□□□ 9.1
DROSHAQ9NRR4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC22.88■■□□□ 1.253e-8■□□□□ 9.1
DROSHAQ9NRR4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.253e-8■□□□□ 9.1
DROSHAQ9NRR4 API5-203ENST00000455725 2257 ntTSL 2 BASIC22.49■■□□□ 1.193e-8■□□□□ 9.1
DROSHAQ9NRR4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.083e-8■□□□□ 9.1
DROSHAQ9NRR4 API5-208ENST00000531273 1868 ntTSL 2 BASIC21.44■■□□□ 1.023e-8■□□□□ 9.1
DROSHAQ9NRR4 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.845e-12■□□□□ 9.1
DROSHAQ9NRR4 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC19.83■□□□□ 0.775e-12■□□□□ 9.1
DROSHAQ9NRR4 RPS7-208ENST00000481006 5429 ntTSL 1 (best)19.33■□□□□ 0.695e-12■□□□□ 9.1
DROSHAQ9NRR4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.485e-6■□□□□ 9.1
DROSHAQ9NRR4 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.193e-8■□□□□ 9.1
DROSHAQ9NRR4 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.155e-6■□□□□ 9.1
DROSHAQ9NRR4 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.13e-8■□□□□ 9.1
DROSHAQ9NRR4 RPS7-203ENST00000406376 704 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.15e-12■□□□□ 9.1
DROSHAQ9NRR4 API5-201ENST00000378852 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.083e-8■□□□□ 9.1
DROSHAQ9NRR4 RPS7-204ENST00000407445 833 ntTSL 2 BASIC12.24□□□□□ -0.455e-12■□□□□ 9.1
DROSHAQ9NRR4 RPS7-206ENST00000472966 556 ntTSL 1 (best)12.05□□□□□ -0.485e-12■□□□□ 9.1
DROSHAQ9NRR4 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.775e-12■□□□□ 9.1
DROSHAQ9NRR4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC10.21□□□□□ -0.783e-8■□□□□ 9.1
DROSHAQ9NRR4 API5-210ENST00000534600 1760 ntTSL 5 BASIC8.26□□□□□ -1.093e-8■□□□□ 9.1
DROSHAQ9NRR4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.665e-9■□□□□ 9.1
DROSHAQ9NRR4 ARHGEF10L-201ENST00000167825 3018 ntTSL 219.62■□□□□ 0.732e-7■□□□□ 9.1
DROSHAQ9NRR4 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.452e-7■□□□□ 9.1
DROSHAQ9NRR4 ARHGEF10L-206ENST00000469726 4585 ntTSL 216.49■□□□□ 0.232e-7■□□□□ 9.1
DROSHAQ9NRR4 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC15.95■□□□□ 0.142e-7■□□□□ 9.1
DROSHAQ9NRR4 ARHGEF10L-204ENST00000375415 4035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.052e-7■□□□□ 9.1
DROSHAQ9NRR4 VAPA-204ENST00000577901 917 ntTSL 225.14■■□□□ 1.613e-6■□□□□ 9.1
DROSHAQ9NRR4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC23.67■■□□□ 1.383e-6■□□□□ 9.1
DROSHAQ9NRR4 VAPA-209ENST00000585042 567 ntTSL 423.56■■□□□ 1.363e-6■□□□□ 9.1
DROSHAQ9NRR4 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.083e-6■□□□□ 9.1
DROSHAQ9NRR4 ADAM10-214ENST00000559053 541 ntTSL 415.19■□□□□ 0.025e-7■□□□□ 9.1
DROSHAQ9NRR4 NOTUM-202ENST00000425009 996 ntTSL 337.38■■■■□ 3.573e-8■□□□□ 9.1
DROSHAQ9NRR4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC34.56■■■■□ 3.123e-8■□□□□ 9.1
DROSHAQ9NRR4 ZNF580-204ENST00000590190 335 ntTSL 329.51■■■□□ 2.313e-8■□□□□ 9.1
DROSHAQ9NRR4 NOTUM-204ENST00000489218 972 ntTSL 229.21■■■□□ 2.273e-8■□□□□ 9.1
DROSHAQ9NRR4 ZNF581-202ENST00000585995 591 ntTSL 329.17■■■□□ 2.263e-8■□□□□ 9.1
DROSHAQ9NRR4 CCDC106-208ENST00000592996 741 ntTSL 328.78■■■□□ 2.23e-8■□□□□ 9.1
DROSHAQ9NRR4 NEAT1_3.1-201ENST00000613347 159 ntBASIC17.07■□□□□ 0.322e-85■□□□□ 9.1
DROSHAQ9NRR4 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.515e-6■□□□□ 9.1
DROSHAQ9NRR4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC43.02■■■■■ 4.486e-6■□□□□ 9.1
DROSHAQ9NRR4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC41.37■■■■■ 4.216e-6■□□□□ 9.1
DROSHAQ9NRR4 ECI1-202ENST00000561688 705 ntTSL 240.94■■■■■ 4.146e-6■□□□□ 9.1
Retrieved 100 of 16,331 protein–RNA pairs in 288.3 ms