RNA–Protein interactions for RNA: ENST00000422064.1

PMS2P3-203, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5 BASIC

Gene PMS2P3, Length 567 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-203ENST00000422064 NISCHQ9Y2I1 1504 aa15.64■□□□□ 0.09
PMS2P3-203ENST00000422064 CCDC180Q9P1Z9 1646 aa13.82□□□□□ -0.2
PMS2P3-203ENST00000422064 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
PMS2P3-203ENST00000422064 DNAJC5Q9H3Z4 198 aa13.49□□□□□ -0.25
PMS2P3-203ENST00000422064 ABCC9O60706 1549 aa13.34□□□□□ -0.27
PMS2P3-203ENST00000422064 ZCCHC6Q5VYS8 1495 aaKnown RBP13.09□□□□□ -0.31
PMS2P3-203ENST00000422064 DCAF1Q9Y4B6 1507 aa13.03□□□□□ -0.32
PMS2P3-203ENST00000422064 MYO15BQ96JP2 1530 aa13.01□□□□□ -0.33
PMS2P3-203ENST00000422064 NACADO15069 1562 aa12.94□□□□□ -0.34
PMS2P3-203ENST00000422064 RB1CC1Q8TDY2 1594 aa12.86□□□□□ -0.35
PMS2P3-203ENST00000422064 DCAF8L2P0C7V8 631 aa12.84□□□□□ -0.35
PMS2P3-203ENST00000422064 SCRIBQ14160 1630 aa12.52□□□□□ -0.4
PMS2P3-203ENST00000422064 UNC13AQ9UPW8 1703 aa12.52□□□□□ -0.41
PMS2P3-203ENST00000422064 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
PMS2P3-203ENST00000422064 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
PMS2P3-203ENST00000422064 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
PMS2P3-203ENST00000422064 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
PMS2P3-203ENST00000422064 CECR2Q9BXF3 1484 aa12.18□□□□□ -0.46
PMS2P3-203ENST00000422064 BAZ1AQ9NRL2 1556 aaPredicted RBP12.12□□□□□ -0.47
PMS2P3-203ENST00000422064 AEBP2Q6ZN18 517 aaPredicted RBP12.09□□□□□ -0.47
PMS2P3-203ENST00000422064 EIF4G1Q04637 1599 aaKnown RBP12.07□□□□□ -0.48
PMS2P3-203ENST00000422064 SMARCA4P51532 1647 aa12.07□□□□□ -0.48
PMS2P3-203ENST00000422064 CUX2O14529 1486 aa12.03□□□□□ -0.48
PMS2P3-203ENST00000422064 MROH2BQ7Z745 1585 aa12.02□□□□□ -0.49
PMS2P3-203ENST00000422064 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
PMS2P3-203ENST00000422064 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
PMS2P3-203ENST00000422064 SMARCA2P51531 1590 aa11.96□□□□□ -0.5
PMS2P3-203ENST00000422064 CC2D2AQ9P2K1 1620 aa11.94□□□□□ -0.5
PMS2P3-203ENST00000422064 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
PMS2P3-203ENST00000422064 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
PMS2P3-203ENST00000422064 WIZO95785 1651 aa11.89□□□□□ -0.51
PMS2P3-203ENST00000422064 HMGXB3Q12766 1538 aa11.89□□□□□ -0.51
PMS2P3-203ENST00000422064 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
PMS2P3-203ENST00000422064 TOP2AP11388 1531 aaKnown RBP11.82□□□□□ -0.52
PMS2P3-203ENST00000422064 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
PMS2P3-203ENST00000422064 ILDR1Q86SU0 546 aaPredicted RBP11.76□□□□□ -0.53
PMS2P3-203ENST00000422064 CCDC88BA6NC98 1476 aa11.67□□□□□ -0.54
PMS2P3-203ENST00000422064 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
PMS2P3-203ENST00000422064 CADPSQ9ULU8 1353 aa11.57□□□□□ -0.56
PMS2P3-203ENST00000422064 CFTRP13569 1480 aa11.57□□□□□ -0.56
PMS2P3-203ENST00000422064 LAMC3Q9Y6N6 1575 aa11.56□□□□□ -0.56
PMS2P3-203ENST00000422064 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
PMS2P3-203ENST00000422064 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
PMS2P3-203ENST00000422064 PDS5BQ9NTI5 1447 aa11.47□□□□□ -0.57
PMS2P3-203ENST00000422064 NESP48681 1621 aa11.45□□□□□ -0.58
PMS2P3-203ENST00000422064 FANCD2Q9BXW9 1451 aa11.41□□□□□ -0.58
PMS2P3-203ENST00000422064 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
PMS2P3-203ENST00000422064 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
PMS2P3-203ENST00000422064 ABCC8Q09428 1581 aa11.35□□□□□ -0.59
PMS2P3-203ENST00000422064 KIF21AQ7Z4S6 1674 aa11.35□□□□□ -0.59
PMS2P3-203ENST00000422064 WRNQ14191 1432 aaPredicted RBP eCLIP11.31□□□□□ -0.6
PMS2P3-203ENST00000422064 MRC2Q9UBG0 1479 aa11.31□□□□□ -0.6
PMS2P3-203ENST00000422064 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
PMS2P3-203ENST00000422064 TOP2BQ02880 1626 aa11.27□□□□□ -0.6
PMS2P3-203ENST00000422064 BIVM-ERCC5R4GMW8 1640 aa11.27□□□□□ -0.6
PMS2P3-203ENST00000422064 WDR62O43379 1518 aa11.27□□□□□ -0.61
PMS2P3-203ENST00000422064 CUX1P39880 1505 aa11.26□□□□□ -0.61
PMS2P3-203ENST00000422064 URB2Q14146 1524 aaKnown RBP11.26□□□□□ -0.61
PMS2P3-203ENST00000422064 TOPBP1Q92547 1522 aa11.26□□□□□ -0.61
PMS2P3-203ENST00000422064 THOC2Q8NI27 1593 aaKnown RBP11.26□□□□□ -0.61
PMS2P3-203ENST00000422064 CHIC1Q5VXU3 224 aa11.26□□□□□ -0.61
PMS2P3-203ENST00000422064 SYNJ1O43426 1573 aa11.24□□□□□ -0.61
PMS2P3-203ENST00000422064 CYB5RLQ6IPT4 315 aa11.19□□□□□ -0.62
PMS2P3-203ENST00000422064 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
PMS2P3-203ENST00000422064 FGD5Q6ZNL6 1462 aa11.18□□□□□ -0.62
PMS2P3-203ENST00000422064 SOGA1O94964 1423 aa11.15□□□□□ -0.62
PMS2P3-203ENST00000422064 IFT140Q96RY7 1462 aa11.14□□□□□ -0.63
PMS2P3-203ENST00000422064 RIMBP3CA6NJZ7 1639 aa11.14□□□□□ -0.63
PMS2P3-203ENST00000422064 RIMBP3BA6NNM3 1639 aa11.14□□□□□ -0.63
PMS2P3-203ENST00000422064 RIMBP3Q9UFD9 1639 aa11.14□□□□□ -0.63
PMS2P3-203ENST00000422064 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
PMS2P3-203ENST00000422064 ABCA10Q8WWZ4 1543 aa11.13□□□□□ -0.63
PMS2P3-203ENST00000422064 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
PMS2P3-203ENST00000422064 SOCS7O14512 581 aa11.1□□□□□ -0.63
PMS2P3-203ENST00000422064 EEA1Q15075 1411 aa11.09□□□□□ -0.63
PMS2P3-203ENST00000422064 RAD54L2Q9Y4B4 1467 aa11.08□□□□□ -0.64
PMS2P3-203ENST00000422064 KIF27Q86VH2 1401 aa11.07□□□□□ -0.64
PMS2P3-203ENST00000422064 LMTK3Q96Q04 1460 aa11.06□□□□□ -0.64
PMS2P3-203ENST00000422064 ARHGEF11O15085 1522 aa11.05□□□□□ -0.64
PMS2P3-203ENST00000422064 ABCA5Q8WWZ7 1642 aa11.04□□□□□ -0.64
PMS2P3-203ENST00000422064 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
PMS2P3-203ENST00000422064 GAPVD1Q14C86 1478 aa11.02□□□□□ -0.65
PMS2P3-203ENST00000422064 FBXO41Q8TF61 875 aa11.02□□□□□ -0.65
PMS2P3-203ENST00000422064 ERICH3Q5RHP9 1530 aa11.02□□□□□ -0.65
PMS2P3-203ENST00000422064 TDRD9Q8NDG6 1382 aaKnown RBP11.01□□□□□ -0.65
PMS2P3-203ENST00000422064 GRIN2BQ13224 1484 aa11□□□□□ -0.65
PMS2P3-203ENST00000422064 ZNF608Q9ULD9 1512 aaPredicted RBP11□□□□□ -0.65
PMS2P3-203ENST00000422064 EIF4G3O43432 1585 aaKnown RBP10.99□□□□□ -0.65
PMS2P3-203ENST00000422064 IGF1RP08069 1367 aa10.99□□□□□ -0.65
PMS2P3-203ENST00000422064 AQRO60306 1485 aaKnown RBP eCLIP10.99□□□□□ -0.652e-6■■■■■ 33.7
PMS2P3-203ENST00000422064 CSRNP3Q8WYN3 585 aa10.98□□□□□ -0.65
PMS2P3-203ENST00000422064 RUSC2Q8N2Y8 1516 aa10.98□□□□□ -0.65
PMS2P3-203ENST00000422064 HRCP23327 699 aa10.97□□□□□ -0.65
PMS2P3-203ENST00000422064 PBRM1Q86U86 1689 aa10.97□□□□□ -0.65
PMS2P3-203ENST00000422064 CUL7Q14999 1698 aa10.96□□□□□ -0.65
PMS2P3-203ENST00000422064 MAGI1Q96QZ7 1491 aaPredicted RBP10.96□□□□□ -0.65
PMS2P3-203ENST00000422064 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
PMS2P3-203ENST00000422064 FHAD1B1AJZ9 1412 aa10.92□□□□□ -0.66
PMS2P3-203ENST00000422064 CARMIL1Q5VZK9 1371 aa10.92□□□□□ -0.66
PMS2P3-203ENST00000422064 KIF21BO75037 1637 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms