Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.97■□□□□ 0.31
CLDN23Q96B33 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.97■□□□□ 0.31
CLDN23Q96B33 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN23Q96B33 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN23Q96B33 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CLDN23Q96B33 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CLDN23Q96B33 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 IGHV3-71-201ENST00000523324 359 ntBASIC16.97■□□□□ 0.31
CLDN23Q96B33 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN23Q96B33 AC009407.1-201ENST00000568958 598 ntBASIC16.97■□□□□ 0.31
CLDN23Q96B33 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 AP001350.2-201ENST00000625104 1094 ntBASIC16.97■□□□□ 0.31
CLDN23Q96B33 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
CLDN23Q96B33 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN23Q96B33 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 LYSMD4-203ENST00000378904 2122 ntBASIC16.96■□□□□ 0.31
CLDN23Q96B33 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 AC098614.1-201ENST00000368528 745 ntBASIC16.96■□□□□ 0.31
CLDN23Q96B33 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 API5-211ENST00000534695 560 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CLDN23Q96B33 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN23Q96B33 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN23Q96B33 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.96■□□□□ 0.3
CLDN23Q96B33 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CLDN23Q96B33 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CLDN23Q96B33 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN23Q96B33 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CLDN23Q96B33 AC087499.5-201ENST00000452760 1342 ntBASIC16.96■□□□□ 0.3
CLDN23Q96B33 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 AL035456.1-201ENST00000456064 1369 ntBASIC16.95■□□□□ 0.3
CLDN23Q96B33 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN23Q96B33 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CLDN23Q96B33 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms