Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
MBD3L1Q8WWY6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L1Q8WWY6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L1Q8WWY6 DBET-201ENST00000630918 3363 ntBASIC13.52□□□□□ -0.25
MBD3L1Q8WWY6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
MBD3L1Q8WWY6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L1Q8WWY6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L1Q8WWY6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MBD3L1Q8WWY6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.52□□□□□ -0.25
MBD3L1Q8WWY6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
MBD3L1Q8WWY6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
MBD3L1Q8WWY6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 AC144831.1-201ENST00000573312 2656 ntBASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 AC006058.4-201ENST00000624016 1670 ntBASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 AC026366.1-201ENST00000488803 879 ntBASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 AC097488.1-201ENST00000507834 756 ntBASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 AP003041.3-201ENST00000527151 707 ntBASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.51□□□□□ -0.25
MBD3L1Q8WWY6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L1Q8WWY6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms