Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.79■□□□□ 0.44
SCML4Q8N228 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SCML4Q8N228 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SCML4Q8N228 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.79■□□□□ 0.44
SCML4Q8N228 KRT18P2-201ENST00000447938 1258 ntBASIC17.79■□□□□ 0.44
SCML4Q8N228 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.79■□□□□ 0.44
SCML4Q8N228 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.79■□□□□ 0.44
SCML4Q8N228 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.79■□□□□ 0.44
SCML4Q8N228 AC091167.2-201ENST00000579581 588 ntBASIC17.79■□□□□ 0.44
SCML4Q8N228 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.79■□□□□ 0.44
SCML4Q8N228 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.79■□□□□ 0.44
SCML4Q8N228 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SCML4Q8N228 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SCML4Q8N228 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.79■□□□□ 0.44
SCML4Q8N228 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SCML4Q8N228 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCML4Q8N228 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.78■□□□□ 0.44
SCML4Q8N228 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.78■□□□□ 0.44
SCML4Q8N228 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.78■□□□□ 0.44
SCML4Q8N228 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.78■□□□□ 0.44
SCML4Q8N228 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.78■□□□□ 0.44
SCML4Q8N228 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.78■□□□□ 0.44
SCML4Q8N228 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.78■□□□□ 0.44
SCML4Q8N228 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.78■□□□□ 0.44
SCML4Q8N228 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 AC007967.2-201ENST00000432613 625 ntBASIC17.78■□□□□ 0.44
SCML4Q8N228 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.78■□□□□ 0.44
SCML4Q8N228 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
SCML4Q8N228 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
SCML4Q8N228 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.78■□□□□ 0.44
SCML4Q8N228 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.78■□□□□ 0.44
SCML4Q8N228 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.78■□□□□ 0.44
SCML4Q8N228 AC010507.1-201ENST00000633895 436 ntBASIC17.78■□□□□ 0.44
SCML4Q8N228 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SCML4Q8N228 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.78■□□□□ 0.44
SCML4Q8N228 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.78■□□□□ 0.44
SCML4Q8N228 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCML4Q8N228 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.77■□□□□ 0.44
SCML4Q8N228 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.77■□□□□ 0.44
SCML4Q8N228 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SCML4Q8N228 AL353732.1-201ENST00000569618 1459 ntBASIC17.77■□□□□ 0.44
SCML4Q8N228 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.77■□□□□ 0.44
SCML4Q8N228 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.77■□□□□ 0.44
SCML4Q8N228 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.77■□□□□ 0.44
SCML4Q8N228 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.77■□□□□ 0.44
SCML4Q8N228 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.77■□□□□ 0.44
SCML4Q8N228 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.77■□□□□ 0.44
SCML4Q8N228 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SCML4Q8N228 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.77■□□□□ 0.44
SCML4Q8N228 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SCML4Q8N228 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.77■□□□□ 0.44
SCML4Q8N228 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCML4Q8N228 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SCML4Q8N228 AP001094.4-201ENST00000579008 2176 ntBASIC17.77■□□□□ 0.43
SCML4Q8N228 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCML4Q8N228 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCML4Q8N228 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCML4Q8N228 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms