Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND3P03897 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND3P03897 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MT-ND3P03897 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND3P03897 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-ND3P03897 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MT-ND3P03897 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-ND3P03897 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.55■□□□□ 0.4
MT-ND3P03897 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
MT-ND3P03897 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.55■□□□□ 0.4
MT-ND3P03897 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.55■□□□□ 0.4
MT-ND3P03897 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-ND3P03897 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-ND3P03897 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MT-ND3P03897 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.55■□□□□ 0.4
MT-ND3P03897 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
MT-ND3P03897 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
MT-ND3P03897 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND3P03897 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.54■□□□□ 0.4
MT-ND3P03897 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 PCDH8P1-201ENST00000428983 2773 ntBASIC17.54■□□□□ 0.4
MT-ND3P03897 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.54■□□□□ 0.4
MT-ND3P03897 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MT-ND3P03897 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.54■□□□□ 0.4
MT-ND3P03897 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.54■□□□□ 0.4
MT-ND3P03897 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.54■□□□□ 0.4
MT-ND3P03897 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.54■□□□□ 0.4
MT-ND3P03897 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MT-ND3P03897 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
MT-ND3P03897 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.54■□□□□ 0.4
MT-ND3P03897 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MT-ND3P03897 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MT-ND3P03897 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
MT-ND3P03897 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND3P03897 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MT-ND3P03897 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.54■□□□□ 0.4
MT-ND3P03897 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
MT-ND3P03897 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-ND3P03897 AL603756.1-201ENST00000606511 2163 ntBASIC17.53■□□□□ 0.4
MT-ND3P03897 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.53■□□□□ 0.4
MT-ND3P03897 KRT18P1-202ENST00000452408 1331 ntBASIC17.53■□□□□ 0.4
MT-ND3P03897 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 AC093525.9-201ENST00000624961 1746 ntBASIC17.53■□□□□ 0.4
MT-ND3P03897 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 DOC2GP-204ENST00000639052 2548 ntBASIC17.53■□□□□ 0.4
MT-ND3P03897 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
MT-ND3P03897 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND3P03897 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MT-ND3P03897 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND3P03897 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-ND3P03897 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MT-ND3P03897 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms