Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
MT-CO1P00395 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MT-CO1P00395 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
MT-CO1P00395 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-CO1P00395 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 MIR574-201ENST00000385209 96 ntBASIC17.64■□□□□ 0.41
MT-CO1P00395 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.64■□□□□ 0.41
MT-CO1P00395 AC136632.2-201ENST00000512891 861 ntBASIC17.64■□□□□ 0.41
MT-CO1P00395 UNC93B6-202ENST00000528242 690 ntBASIC17.64■□□□□ 0.41
MT-CO1P00395 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.64■□□□□ 0.41
MT-CO1P00395 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.64■□□□□ 0.41
MT-CO1P00395 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-CO1P00395 AL139424.1-201ENST00000607572 797 ntBASIC17.64■□□□□ 0.41
MT-CO1P00395 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
MT-CO1P00395 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MT-CO1P00395 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-CO1P00395 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-CO1P00395 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
MT-CO1P00395 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.63■□□□□ 0.41
MT-CO1P00395 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
MT-CO1P00395 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
MT-CO1P00395 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MT-CO1P00395 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.63■□□□□ 0.41
MT-CO1P00395 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.63■□□□□ 0.41
MT-CO1P00395 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.63■□□□□ 0.41
MT-CO1P00395 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.63■□□□□ 0.41
MT-CO1P00395 AC145285.3-201ENST00000564603 959 ntBASIC17.63■□□□□ 0.41
MT-CO1P00395 AL353135.1-201ENST00000606729 504 ntBASIC17.63■□□□□ 0.41
MT-CO1P00395 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MT-CO1P00395 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.63■□□□□ 0.41
MT-CO1P00395 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
MT-CO1P00395 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.63■□□□□ 0.41
MT-CO1P00395 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MT-CO1P00395 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
MT-CO1P00395 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MT-CO1P00395 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MT-CO1P00395 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MT-CO1P00395 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
MT-CO1P00395 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 AC108860.2-201ENST00000562760 2183 ntBASIC17.62■□□□□ 0.41
MT-CO1P00395 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.62■□□□□ 0.41
MT-CO1P00395 AC034105.1-201ENST00000563488 319 ntBASIC17.62■□□□□ 0.41
MT-CO1P00395 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.62■□□□□ 0.41
MT-CO1P00395 MIR1199-201ENST00000621445 119 ntBASIC17.62■□□□□ 0.41
MT-CO1P00395 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.62■□□□□ 0.41
MT-CO1P00395 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.62■□□□□ 0.41
MT-CO1P00395 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.62■□□□□ 0.41
MT-CO1P00395 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 AC141586.5-201ENST00000624546 2050 ntBASIC17.62■□□□□ 0.41
MT-CO1P00395 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
MT-CO1P00395 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MT-CO1P00395 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.62■□□□□ 0.41
MT-CO1P00395 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.61■□□□□ 0.41
MT-CO1P00395 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.61■□□□□ 0.41
MT-CO1P00395 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MT-CO1P00395 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms