Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL41O60662 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL41O60662 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL41O60662 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL41O60662 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL41O60662 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL41O60662 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL41O60662 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHL41O60662 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHL41O60662 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHL41O60662 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL41O60662 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL41O60662 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
KLHL41O60662 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL41O60662 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHL41O60662 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL41O60662 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
KLHL41O60662 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.11■□□□□ 0.33
KLHL41O60662 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.11■□□□□ 0.33
KLHL41O60662 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KLHL41O60662 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
KLHL41O60662 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.11■□□□□ 0.33
KLHL41O60662 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.11■□□□□ 0.33
KLHL41O60662 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.11■□□□□ 0.33
KLHL41O60662 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.11■□□□□ 0.33
KLHL41O60662 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.11■□□□□ 0.33
KLHL41O60662 AP002383.4-201ENST00000442518 975 ntBASIC17.11■□□□□ 0.33
KLHL41O60662 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KLHL41O60662 KRT17P6-201ENST00000453795 1220 ntBASIC17.11■□□□□ 0.33
KLHL41O60662 GUSBP12-201ENST00000513727 720 ntBASIC17.11■□□□□ 0.33
KLHL41O60662 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KLHL41O60662 AC091304.2-201ENST00000564639 760 ntBASIC17.11■□□□□ 0.33
KLHL41O60662 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.11■□□□□ 0.33
KLHL41O60662 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.11■□□□□ 0.33
KLHL41O60662 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KLHL41O60662 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KLHL41O60662 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL41O60662 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KLHL41O60662 AC116353.5-201ENST00000638148 1699 ntBASIC17.1■□□□□ 0.33
KLHL41O60662 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.1■□□□□ 0.33
KLHL41O60662 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.1■□□□□ 0.33
KLHL41O60662 AC104819.1-201ENST00000504587 486 ntBASIC17.1■□□□□ 0.33
KLHL41O60662 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.1■□□□□ 0.33
KLHL41O60662 Z69720.1-201ENST00000601483 472 ntBASIC17.1■□□□□ 0.33
KLHL41O60662 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KLHL41O60662 IGHV3-41-201ENST00000613121 348 ntBASIC17.1■□□□□ 0.33
KLHL41O60662 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KLHL41O60662 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KLHL41O60662 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.1■□□□□ 0.33
KLHL41O60662 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KLHL41O60662 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.1■□□□□ 0.33
KLHL41O60662 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KLHL41O60662 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KLHL41O60662 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
KLHL41O60662 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.09■□□□□ 0.33
KLHL41O60662 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KLHL41O60662 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KLHL41O60662 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms