Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 BNIP3P29-201ENST00000598302 571 ntBASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 AC011447.5-201ENST00000616168 564 ntBASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 AC087499.6-201ENST00000411576 835 ntBASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 DFFBP1-201ENST00000433250 979 ntBASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 RN7SL837P-201ENST00000463010 287 ntBASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 SNX29P1-201ENST00000548357 1007 ntBASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 CHCHD2P3-201ENST00000603038 451 ntBASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 AC018529.1-201ENST00000613063 361 ntBASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 AC004840.1-201ENST00000636359 365 ntBASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1QTNF9BB2RNN3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
C1QTNF9BB2RNN3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
C1QTNF9BB2RNN3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
C1QTNF9BB2RNN3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
C1QTNF9BB2RNN3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
C1QTNF9BB2RNN3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
C1QTNF9BB2RNN3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.02■□□□□ 0.15
C1QTNF9BB2RNN3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
C1QTNF9BB2RNN3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
C1QTNF9BB2RNN3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
C1QTNF9BB2RNN3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
C1QTNF9BB2RNN3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 AC004408.2-201ENST00000623613 2777 ntBASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 HLA-V-204ENST00000476601 1289 ntBASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 AC093503.3-201ENST00000624917 2352 ntBASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C1QTNF9BB2RNN3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms