Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 LINC02199-201ENST00000506655 2702 ntBASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
TCRBV9S1A1TA0A576 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 AL645728.1-201ENST00000366221 2101 ntBASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 KLF4P1-201ENST00000412782 1185 ntBASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 AL136038.3-201ENST00000561909 1096 ntBASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 AC011467.2-201ENST00000598425 242 ntBASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 LINC01023-201ENST00000606054 436 ntBASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV9S1A1TA0A576 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 AC046158.3-201ENST00000624947 2558 ntBASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 DUX4L26-201ENST00000489078 1255 ntBASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 AP005901.3-202ENST00000581653 237 ntBASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 HLA-A-202ENST00000376806 1854 ntBASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms