Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRGV5A0A0B4J1U4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 ELL2P1-201ENST00000413990 1906 ntBASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 AC068137.2-201ENST00000605408 478 ntBASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 AL596442.2-201ENST00000610240 980 ntBASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRGV5A0A0B4J1U4 AL138688.1-201ENST00000624851 1594 ntBASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV5A0A0B4J1U4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV5A0A0B4J1U4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms