Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 AC009336.1-201ENST00000608941 1553 ntBASIC16.29■□□□□ 0.2
VAPAQ9P0L0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VAPAQ9P0L0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 AL645929.1-201ENST00000420084 975 ntBASIC16.28■□□□□ 0.2
VAPAQ9P0L0 TSPY22P-201ENST00000427496 604 ntBASIC16.28■□□□□ 0.2
VAPAQ9P0L0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 AC073912.3-201ENST00000624414 853 ntBASIC16.28■□□□□ 0.2
VAPAQ9P0L0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 AL391005.1-201ENST00000623953 2435 ntBASIC16.28■□□□□ 0.2
VAPAQ9P0L0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPAQ9P0L0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 STK19B-204ENST00000512515 211 ntBASIC16.27■□□□□ 0.2
VAPAQ9P0L0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VAPAQ9P0L0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VAPAQ9P0L0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VAPAQ9P0L0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms