Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNA5SP419-201ENST00000515908 135 ntBASIC15.71■□□□□ 0.11
NPAS1Q99742 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS1Q99742 AC012640.2-201ENST00000561606 901 ntBASIC15.71■□□□□ 0.11
NPAS1Q99742 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS1Q99742 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.71■□□□□ 0.11
NPAS1Q99742 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS1Q99742 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPAS1Q99742 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
NPAS1Q99742 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NPAS1Q99742 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NPAS1Q99742 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPAS1Q99742 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS1Q99742 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.71■□□□□ 0.1
NPAS1Q99742 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.71■□□□□ 0.1
NPAS1Q99742 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS1Q99742 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPAS1Q99742 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.7■□□□□ 0.1
NPAS1Q99742 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS1Q99742 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPAS1Q99742 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS1Q99742 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS1Q99742 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS1Q99742 SCARNA2-201ENST00000458748 420 ntBASIC15.7■□□□□ 0.1
NPAS1Q99742 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.7■□□□□ 0.1
NPAS1Q99742 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPAS1Q99742 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.7■□□□□ 0.1
NPAS1Q99742 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS1Q99742 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NPAS1Q99742 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS1Q99742 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPAS1Q99742 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPAS1Q99742 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS1Q99742 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS1Q99742 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPAS1Q99742 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPAS1Q99742 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS1Q99742 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NPAS1Q99742 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS1Q99742 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NPAS1Q99742 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS1Q99742 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 LINC00982-205ENST00000420957 435 ntBASIC15.69■□□□□ 0.1
NPAS1Q99742 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 KRT18P67-201ENST00000432816 1264 ntBASIC15.69■□□□□ 0.1
NPAS1Q99742 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
NPAS1Q99742 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS1Q99742 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS1Q99742 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS1Q99742 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS1Q99742 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.69■□□□□ 0.1
NPAS1Q99742 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
NPAS1Q99742 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NPAS1Q99742 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 AC116353.5-201ENST00000638148 1699 ntBASIC15.69■□□□□ 0.1
NPAS1Q99742 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS1Q99742 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NPAS1Q99742 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NPAS1Q99742 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NPAS1Q99742 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS1Q99742 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms