Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 KRT18P67-201ENST00000432816 1264 ntBASIC15.23■□□□□ 0.03
RTTNQ86VV8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 AL121772.3-201ENST00000610840 674 ntBASIC15.23■□□□□ 0.03
RTTNQ86VV8 LINC01451-201ENST00000623792 534 ntBASIC15.23■□□□□ 0.03
RTTNQ86VV8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 HLA-J-201ENST00000462773 1622 ntBASIC15.23■□□□□ 0.03
RTTNQ86VV8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 AC009053.2-201ENST00000563701 2365 ntBASIC15.23■□□□□ 0.03
RTTNQ86VV8 SIGLEC16-201ENST00000599858 1437 ntBASIC15.23■□□□□ 0.03
RTTNQ86VV8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 AKR1C7P-201ENST00000305623 895 ntBASIC15.23■□□□□ 0.03
RTTNQ86VV8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 RCN1P2-201ENST00000398357 915 ntBASIC15.23■□□□□ 0.03
RTTNQ86VV8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.23■□□□□ 0.03
RTTNQ86VV8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTTNQ86VV8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 TP73-AS1-207ENST00000624167 988 ntBASIC15.22■□□□□ 0.03
RTTNQ86VV8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.22■□□□□ 0.03
RTTNQ86VV8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTTNQ86VV8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTTNQ86VV8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.21■□□□□ 0.03
RTTNQ86VV8 AL691403.2-201ENST00000618460 490 ntBASIC15.21■□□□□ 0.03
RTTNQ86VV8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.21■□□□□ 0.03
RTTNQ86VV8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms