Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.67■□□□□ 0.1
CENPAP49450 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.67■□□□□ 0.1
CENPAP49450 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CENPAP49450 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CENPAP49450 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CENPAP49450 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CENPAP49450 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.66■□□□□ 0.1
CENPAP49450 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.66■□□□□ 0.1
CENPAP49450 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CENPAP49450 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CENPAP49450 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.66■□□□□ 0.1
CENPAP49450 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.66■□□□□ 0.1
CENPAP49450 AC063952.2-201ENST00000498792 1227 ntBASIC15.66■□□□□ 0.1
CENPAP49450 AC022616.7-201ENST00000525383 220 ntBASIC15.66■□□□□ 0.1
CENPAP49450 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.66■□□□□ 0.1
CENPAP49450 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.66■□□□□ 0.1
CENPAP49450 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 AL139327.4-201ENST00000612362 153 ntBASIC15.66■□□□□ 0.1
CENPAP49450 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.66■□□□□ 0.1
CENPAP49450 AC067930.6-201ENST00000623257 4947 ntBASIC15.66■□□□□ 0.1
CENPAP49450 AL596257.1-201ENST00000641463 2694 ntBASIC15.66■□□□□ 0.1
CENPAP49450 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.66■□□□□ 0.1
CENPAP49450 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CENPAP49450 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CENPAP49450 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
CENPAP49450 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.65■□□□□ 0.1
CENPAP49450 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CENPAP49450 LYSMD4-203ENST00000378904 2122 ntBASIC15.65■□□□□ 0.1
CENPAP49450 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.65■□□□□ 0.1
CENPAP49450 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.65■□□□□ 0.1
CENPAP49450 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.65■□□□□ 0.1
CENPAP49450 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CENPAP49450 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.65■□□□□ 0.1
CENPAP49450 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.65■□□□□ 0.1
CENPAP49450 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CENPAP49450 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.65■□□□□ 0.1
CENPAP49450 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.65■□□□□ 0.1
CENPAP49450 AL645929.1-201ENST00000420084 975 ntBASIC15.65■□□□□ 0.1
CENPAP49450 TMPOP1-202ENST00000424642 1267 ntBASIC15.65■□□□□ 0.1
CENPAP49450 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.65■□□□□ 0.1
CENPAP49450 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.65■□□□□ 0.1
CENPAP49450 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 AC124864.1-201ENST00000623408 392 ntBASIC15.65■□□□□ 0.1
CENPAP49450 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.65■□□□□ 0.1
CENPAP49450 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CENPAP49450 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPAP49450 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CENPAP49450 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CENPAP49450 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CENPAP49450 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CENPAP49450 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.64■□□□□ 0.09
CENPAP49450 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CENPAP49450 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CENPAP49450 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CENPAP49450 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CENPAP49450 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms