Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 UBE2V1-217ENST00000486653 563 ntTSL 411.21□□□□□ -0.614e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC10.6□□□□□ -0.714e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-205ENST00000396059 1983 ntTSL 1 (best)10.48□□□□□ -0.734e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC10.11□□□□□ -0.794e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-211ENST00000467839 566 ntTSL 29.61□□□□□ -0.874e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-216ENST00000483534 1155 ntTSL 1 (best)9.61□□□□□ -0.874e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC9.11□□□□□ -0.954e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.84□□□□□ -0.994e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-208ENST00000432266 569 ntTSL 46.63□□□□□ -1.354e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-219ENST00000490555 549 ntTSL 46.22□□□□□ -1.414e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-220ENST00000492371 535 ntTSL 35.94□□□□□ -1.464e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-221ENST00000493090 563 ntTSL 45.94□□□□□ -1.464e-6■■□□□ 14.1
GTF2F1P35269 UBE2V1-214ENST00000472923 421 ntTSL 54.94□□□□□ -1.624e-6■■□□□ 14.1
GTF2F1P35269 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.43■■□□□ 1.56e-9■■□□□ 14.1
GTF2F1P35269 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.926e-9■■□□□ 14.1
GTF2F1P35269 USP10-208ENST00000563386 590 ntTSL 420.81■□□□□ 0.923e-8■■□□□ 14.1
GTF2F1P35269 USP10-205ENST00000562743 888 ntTSL 220.73■□□□□ 0.913e-8■■□□□ 14.1
GTF2F1P35269 USP10-211ENST00000564566 561 ntTSL 419.52■□□□□ 0.723e-8■■□□□ 14.1
GTF2F1P35269 USP10-203ENST00000562092 254 ntTSL 519.13■□□□□ 0.653e-8■■□□□ 14.1
GTF2F1P35269 USP10-210ENST00000563892 570 ntTSL 319.13■□□□□ 0.653e-8■■□□□ 14.1
GTF2F1P35269 USP10-216ENST00000569511 571 ntTSL 519.13■□□□□ 0.653e-8■■□□□ 14.1
GTF2F1P35269 USP10-204ENST00000562283 569 ntTSL 418.9■□□□□ 0.623e-8■■□□□ 14.1
GTF2F1P35269 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.311e-6■■□□□ 14.1
GTF2F1P35269 USP10-219ENST00000570191 2717 ntTSL 2 BASIC14.35□□□□□ -0.111e-6■■□□□ 14.1
GTF2F1P35269 USP10-202ENST00000540269 3070 ntTSL 1 (best)14.25□□□□□ -0.131e-6■■□□□ 14.1
GTF2F1P35269 USP10-207ENST00000563048 1315 ntTSL 213.62□□□□□ -0.231e-6■■□□□ 14.1
GTF2F1P35269 USP10-215ENST00000569038 730 ntTSL 312.84□□□□□ -0.353e-8■■□□□ 14.1
GTF2F1P35269 USP10-218ENST00000570053 502 ntTSL 36.76□□□□□ -1.333e-8■■□□□ 14.1
GTF2F1P35269 ARHGAP4-224ENST00000494813 1939 ntTSL 524.64■■□□□ 1.531e-8■■□□□ 14.1
GTF2F1P35269 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.181e-8■■□□□ 14.1
GTF2F1P35269 ARHGAP4-222ENST00000494302 2667 ntTSL 521.11■□□□□ 0.971e-8■■□□□ 14.1
GTF2F1P35269 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.14■□□□□ 0.821e-8■■□□□ 14.1
GTF2F1P35269 ARHGAP4-219ENST00000470209 2889 ntTSL 519.93■□□□□ 0.781e-8■■□□□ 14.1
GTF2F1P35269 ARHGAP4-205ENST00000404127 3232 ntTSL 519.63■□□□□ 0.731e-8■■□□□ 14.1
GTF2F1P35269 ARHGAP4-207ENST00000420383 2817 ntTSL 219.54■□□□□ 0.721e-8■■□□□ 14.1
GTF2F1P35269 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.431e-8■■□□□ 14.1
GTF2F1P35269 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.361e-8■■□□□ 14.1
GTF2F1P35269 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.191e-8■■□□□ 14.1
GTF2F1P35269 DDX39A-208ENST00000588692 1478 ntTSL 516.01■□□□□ 0.151e-8■■□□□ 14.1
GTF2F1P35269 ARHGAP4-209ENST00000422918 642 ntTSL 515.8■□□□□ 0.121e-8■■□□□ 14.1
GTF2F1P35269 DDX39A-213ENST00000590315 566 ntTSL 513.75□□□□□ -0.211e-8■■□□□ 14.1
GTF2F1P35269 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.722e-15■■□□□ 14.1
GTF2F1P35269 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC9.38□□□□□ -0.912e-15■■□□□ 14.1
GTF2F1P35269 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.922e-15■■□□□ 14.1
GTF2F1P35269 STXBP5-202ENST00000367475 521 ntTSL 58.18□□□□□ -1.12e-15■■□□□ 14.1
GTF2F1P35269 STXBP5-205ENST00000392291 791 ntTSL 56.09□□□□□ -1.432e-15■■□□□ 14.1
GTF2F1P35269 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.77■■□□□ 1.882e-6■■□□□ 14.1
GTF2F1P35269 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.542e-6■■□□□ 14.1
GTF2F1P35269 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21■□□□□ 0.953e-6■■□□□ 14.1
GTF2F1P35269 MELTF-203ENST00000439320 629 ntTSL 319.66■□□□□ 0.743e-6■■□□□ 14.1
GTF2F1P35269 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.673e-6■■□□□ 14.1
GTF2F1P35269 STAG3L5P-PVRIG2P-PILRB-203ENST00000470714 868 ntTSL 317.95■□□□□ 0.461e-11■■□□□ 14.1
GTF2F1P35269 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.97■□□□□ 0.316e-18■■□□□ 14.1
GTF2F1P35269 STAG3L5P-PVRIG2P-PILRB-202ENST00000444874 2661 ntTSL 216.65■□□□□ 0.263e-9■■□□□ 14.1
GTF2F1P35269 STAG3L5P-PVRIG2P-PILRB-205ENST00000483329 819 ntTSL 513.65□□□□□ -0.221e-11■■□□□ 14.1
GTF2F1P35269 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC13.25□□□□□ -0.293e-9■■□□□ 14.1
GTF2F1P35269 STAG3L5P-PVRIG2P-PILRB-204ENST00000472646 553 ntTSL 512.07□□□□□ -0.482e-9■■□□□ 14.1
GTF2F1P35269 PLXNA3-209ENST00000497802 729 ntTSL 216.46■□□□□ 0.233e-6■■□□□ 14
GTF2F1P35269 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.223e-6■■□□□ 14
GTF2F1P35269 RBCK1-214ENST00000621487 473 ntTSL 218.24■□□□□ 0.511e-16■■□□□ 14
GTF2F1P35269 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.33■■□□□ 1.659e-7■■□□□ 14
GTF2F1P35269 FBXO7-204ENST00000425028 1921 ntTSL 522.52■■□□□ 1.29e-7■■□□□ 14
GTF2F1P35269 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.146e-16■■□□□ 14
GTF2F1P35269 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.16e-16■■□□□ 14
GTF2F1P35269 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.819e-7■■□□□ 14
GTF2F1P35269 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.65■□□□□ 0.749e-7■■□□□ 14
GTF2F1P35269 FBXO7-203ENST00000420700 1900 ntTSL 519.33■□□□□ 0.689e-7■■□□□ 14
GTF2F1P35269 RAB3GAP2-201ENST00000237724 821 ntTSL 317.96■□□□□ 0.479e-7■■□□□ 14
GTF2F1P35269 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.37■□□□□ 0.219e-7■■□□□ 14
GTF2F1P35269 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC13.78□□□□□ -0.29e-7■■□□□ 14
GTF2F1P35269 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.299e-7■■□□□ 14
GTF2F1P35269 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.319e-7■■□□□ 14
GTF2F1P35269 RAB3GAP2-204ENST00000474178 539 ntTSL 411.79□□□□□ -0.529e-7■■□□□ 14
GTF2F1P35269 AC104758.1-201ENST00000563867 380 ntBASIC11.46□□□□□ -0.579e-7■■□□□ 14
GTF2F1P35269 RAB3GAP2-207ENST00000478976 575 ntTSL 411.22□□□□□ -0.619e-7■■□□□ 14
GTF2F1P35269 RAB3GAP2-203ENST00000462353 1906 ntTSL 1 (best)10.43□□□□□ -0.749e-7■■□□□ 14
GTF2F1P35269 RAB3GAP2-206ENST00000475769 375 ntTSL 39.26□□□□□ -0.939e-7■■□□□ 14
GTF2F1P35269 FBXO7-209ENST00000492535 6884 ntTSL 58.94□□□□□ -0.989e-7■■□□□ 14
GTF2F1P35269 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.62□□□□□ -1.199e-7■■□□□ 14
GTF2F1P35269 EMC10-207ENST00000599293 1926 ntTSL 329.63■■■□□ 2.331e-9■■□□□ 14
GTF2F1P35269 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.311e-9■■□□□ 14
GTF2F1P35269 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.831e-9■■□□□ 14
GTF2F1P35269 EMC10-208ENST00000601780 2178 ntTSL 1 (best)24.85■■□□□ 1.571e-9■■□□□ 14
GTF2F1P35269 HDDC2-210ENST00000609574 607 ntTSL 218.11■□□□□ 0.491e-9■■□□□ 14
GTF2F1P35269 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.11■□□□□ 0.491e-9■■□□□ 14
GTF2F1P35269 HDDC2-201ENST00000318787 1350 ntTSL 1 (best)17.79■□□□□ 0.441e-9■■□□□ 14
GTF2F1P35269 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.05■□□□□ 0.161e-9■■□□□ 14
GTF2F1P35269 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.141e-9■■□□□ 14
GTF2F1P35269 HDDC2-209ENST00000609477 564 ntTSL 415.51■□□□□ 0.071e-9■■□□□ 14
GTF2F1P35269 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.071e-9■■□□□ 14
GTF2F1P35269 HDDC2-206ENST00000608461 587 ntTSL 215.51■□□□□ 0.071e-9■■□□□ 14
GTF2F1P35269 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.841e-9■■□□□ 14
GTF2F1P35269 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.041e-7■■□□□ 13.9
GTF2F1P35269 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.271e-6■■□□□ 13.9
GTF2F1P35269 PCED1A-204ENST00000448755 1170 ntTSL 320.96■□□□□ 0.951e-6■■□□□ 13.9
GTF2F1P35269 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.38■□□□□ 0.691e-6■■□□□ 13.9
GTF2F1P35269 PCED1A-203ENST00000439542 1187 ntTSL 217.93■□□□□ 0.461e-6■■□□□ 13.9
GTF2F1P35269 GPS1-225ENST00000585084 997 ntTSL 331.99■■■□□ 2.712e-9■■□□□ 13.9
GTF2F1P35269 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.32■■■□□ 2.122e-9■■□□□ 13.9
GTF2F1P35269 GPS1-223ENST00000584229 535 ntTSL 326.84■■□□□ 1.892e-9■■□□□ 13.9
Retrieved 100 of 18,214 protein–RNA pairs in 104.9 ms