Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.45■□□□□ 0.38
RPA3P35244 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.45■□□□□ 0.38
RPA3P35244 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.45■□□□□ 0.38
RPA3P35244 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPA3P35244 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.45■□□□□ 0.38
RPA3P35244 AL662844.4-201ENST00000606367 2838 ntBASIC17.44■□□□□ 0.38
RPA3P35244 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 AC092068.3-201ENST00000587894 2016 ntBASIC17.44■□□□□ 0.38
RPA3P35244 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RPA3P35244 AC112698.1-201ENST00000510299 916 ntBASIC17.44■□□□□ 0.38
RPA3P35244 KRT8P26-201ENST00000534154 1276 ntBASIC17.44■□□□□ 0.38
RPA3P35244 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.44■□□□□ 0.38
RPA3P35244 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RPA3P35244 AL121672.3-201ENST00000608644 468 ntBASIC17.44■□□□□ 0.38
RPA3P35244 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RPA3P35244 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.44■□□□□ 0.38
RPA3P35244 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RPA3P35244 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RPA3P35244 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RPA3P35244 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
RPA3P35244 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RPA3P35244 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.44■□□□□ 0.38
RPA3P35244 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.44■□□□□ 0.38
RPA3P35244 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.44■□□□□ 0.38
RPA3P35244 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPA3P35244 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.43■□□□□ 0.38
RPA3P35244 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RPA3P35244 AL391005.1-201ENST00000623953 2435 ntBASIC17.43■□□□□ 0.38
RPA3P35244 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.43■□□□□ 0.38
RPA3P35244 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
RPA3P35244 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.43■□□□□ 0.38
RPA3P35244 GUSBP12-201ENST00000513727 720 ntBASIC17.43■□□□□ 0.38
RPA3P35244 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.43■□□□□ 0.38
RPA3P35244 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.43■□□□□ 0.38
RPA3P35244 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.43■□□□□ 0.38
RPA3P35244 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RPA3P35244 AC009154.2-201ENST00000621177 724 ntBASIC17.43■□□□□ 0.38
RPA3P35244 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.43■□□□□ 0.38
RPA3P35244 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.43■□□□□ 0.38
RPA3P35244 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RPA3P35244 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
RPA3P35244 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPA3P35244 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.42■□□□□ 0.38
RPA3P35244 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RPA3P35244 OR6D1P-203ENST00000641209 4860 ntBASIC17.42■□□□□ 0.38
RPA3P35244 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RPA3P35244 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.42■□□□□ 0.38
RPA3P35244 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.42■□□□□ 0.38
RPA3P35244 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RPA3P35244 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPA3P35244 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.42■□□□□ 0.38
RPA3P35244 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
RPA3P35244 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.42■□□□□ 0.38
RPA3P35244 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.42■□□□□ 0.38
RPA3P35244 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.42■□□□□ 0.38
RPA3P35244 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms