Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCLP19338 DOC2GP-204ENST00000639052 2548 ntBASIC20.56■□□□□ 0.88
NCLP19338 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.56■□□□□ 0.88
NCLP19338 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCLP19338 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NCLP19338 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.56■□□□□ 0.88
NCLP19338 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.56■□□□□ 0.88
NCLP19338 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.56■□□□□ 0.88
NCLP19338 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCLP19338 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCLP19338 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
NCLP19338 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NCLP19338 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NCLP19338 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NCLP19338 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCLP19338 AC060834.1-201ENST00000443027 2032 ntBASIC20.56■□□□□ 0.88
NCLP19338 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.56■□□□□ 0.88
NCLP19338 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.56■□□□□ 0.88
NCLP19338 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCLP19338 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
NCLP19338 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.56■□□□□ 0.88
NCLP19338 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.56■□□□□ 0.88
NCLP19338 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCLP19338 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCLP19338 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.55■□□□□ 0.88
NCLP19338 HYMAI-201ENST00000635591 3347 ntBASIC20.55■□□□□ 0.88
NCLP19338 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC20.55■□□□□ 0.88
NCLP19338 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCLP19338 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.55■□□□□ 0.88
NCLP19338 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NCLP19338 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCLP19338 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NCLP19338 AL359075.1-203ENST00000462729 1002 ntBASIC20.55■□□□□ 0.88
NCLP19338 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NCLP19338 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.55■□□□□ 0.88
NCLP19338 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.55■□□□□ 0.88
NCLP19338 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.55■□□□□ 0.88
NCLP19338 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.55■□□□□ 0.88
NCLP19338 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
NCLP19338 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCLP19338 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCLP19338 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCLP19338 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCLP19338 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCLP19338 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NCLP19338 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCLP19338 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NCLP19338 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
NCLP19338 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NCLP19338 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 PVRIG2P-201ENST00000435460 978 ntBASIC20.54■□□□□ 0.88
NCLP19338 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.54■□□□□ 0.88
NCLP19338 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.54■□□□□ 0.88
NCLP19338 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.54■□□□□ 0.88
NCLP19338 AC091076.1-201ENST00000610741 619 ntBASIC20.54■□□□□ 0.88
NCLP19338 AL358472.4-201ENST00000633140 710 ntBASIC20.54■□□□□ 0.88
NCLP19338 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NCLP19338 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NCLP19338 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.53■□□□□ 0.88
NCLP19338 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.53■□□□□ 0.88
NCLP19338 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NCLP19338 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.53■□□□□ 0.88
NCLP19338 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NCLP19338 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.53■□□□□ 0.88
NCLP19338 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NCLP19338 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.53■□□□□ 0.88
NCLP19338 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 KRT18P38-201ENST00000449496 1282 ntBASIC20.53■□□□□ 0.88
NCLP19338 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.53■□□□□ 0.88
NCLP19338 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms