Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.76■□□□□ 0.91
COL11A2P13942 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A2P13942 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A2P13942 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL11A2P13942 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A2P13942 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.76■□□□□ 0.91
COL11A2P13942 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A2P13942 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.75■□□□□ 0.91
COL11A2P13942 GIMAP3P-201ENST00000495150 836 ntBASIC20.75■□□□□ 0.91
COL11A2P13942 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.75■□□□□ 0.91
COL11A2P13942 AC003101.2-201ENST00000612557 442 ntBASIC20.75■□□□□ 0.91
COL11A2P13942 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A2P13942 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
COL11A2P13942 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
COL11A2P13942 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A2P13942 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A2P13942 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.75■□□□□ 0.91
COL11A2P13942 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A2P13942 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A2P13942 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COL11A2P13942 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A2P13942 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A2P13942 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
COL11A2P13942 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A2P13942 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.75■□□□□ 0.91
COL11A2P13942 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.75■□□□□ 0.91
COL11A2P13942 GPR53P-205ENST00000457298 1084 ntBASIC20.75■□□□□ 0.91
COL11A2P13942 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.75■□□□□ 0.91
COL11A2P13942 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.75■□□□□ 0.91
COL11A2P13942 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.75■□□□□ 0.91
COL11A2P13942 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
COL11A2P13942 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.75■□□□□ 0.91
COL11A2P13942 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.75■□□□□ 0.91
COL11A2P13942 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.75■□□□□ 0.91
COL11A2P13942 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A2P13942 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A2P13942 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.75■□□□□ 0.91
COL11A2P13942 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.74■□□□□ 0.91
COL11A2P13942 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A2P13942 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.74■□□□□ 0.91
COL11A2P13942 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 AC022494.1-201ENST00000466044 728 ntBASIC20.74■□□□□ 0.91
COL11A2P13942 HLA-V-204ENST00000476601 1289 ntBASIC20.74■□□□□ 0.91
COL11A2P13942 SPDYE18-201ENST00000510091 1050 ntBASIC20.74■□□□□ 0.91
COL11A2P13942 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.74■□□□□ 0.91
COL11A2P13942 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A2P13942 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A2P13942 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.74■□□□□ 0.91
COL11A2P13942 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A2P13942 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A2P13942 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.74■□□□□ 0.91
COL11A2P13942 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A2P13942 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
COL11A2P13942 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 ACA64.2-201ENST00000459014 129 ntBASIC20.73■□□□□ 0.91
COL11A2P13942 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.73■□□□□ 0.91
COL11A2P13942 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COL11A2P13942 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.73■□□□□ 0.91
COL11A2P13942 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
COL11A2P13942 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COL11A2P13942 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL11A2P13942 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.73■□□□□ 0.91
COL11A2P13942 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
COL11A2P13942 AC009407.1-201ENST00000568958 598 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms