Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLPXO76031 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLPXO76031 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.7■□□□□ 0.1
CLPXO76031 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.69■□□□□ 0.1
CLPXO76031 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CLPXO76031 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.69■□□□□ 0.1
CLPXO76031 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CLPXO76031 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLPXO76031 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CLPXO76031 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.69■□□□□ 0.1
CLPXO76031 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 MIR564-202ENST00000385049 94 ntBASIC15.69■□□□□ 0.1
CLPXO76031 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 AC091390.4-202ENST00000476426 537 ntBASIC15.69■□□□□ 0.1
CLPXO76031 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.69■□□□□ 0.1
CLPXO76031 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.69■□□□□ 0.1
CLPXO76031 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.69■□□□□ 0.1
CLPXO76031 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CLPXO76031 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.69■□□□□ 0.1
CLPXO76031 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.69■□□□□ 0.1
CLPXO76031 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLPXO76031 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.69■□□□□ 0.1
CLPXO76031 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPXO76031 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.68■□□□□ 0.1
CLPXO76031 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.68■□□□□ 0.1
CLPXO76031 DGCR10-201ENST00000609839 495 ntBASIC15.68■□□□□ 0.1
CLPXO76031 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.68■□□□□ 0.1
CLPXO76031 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.68■□□□□ 0.1
CLPXO76031 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.68■□□□□ 0.1
CLPXO76031 LINC02012-201ENST00000608206 1725 ntBASIC15.68■□□□□ 0.1
CLPXO76031 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPXO76031 AL163051.1-201ENST00000569214 1512 ntBASIC15.68■□□□□ 0.1
CLPXO76031 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.68■□□□□ 0.1
CLPXO76031 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLPXO76031 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPXO76031 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.67■□□□□ 0.1
CLPXO76031 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPXO76031 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPXO76031 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPXO76031 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLPXO76031 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.67■□□□□ 0.1
CLPXO76031 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.67■□□□□ 0.1
CLPXO76031 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLPXO76031 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPXO76031 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPXO76031 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPXO76031 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CLPXO76031 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.67■□□□□ 0.1
CLPXO76031 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPXO76031 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms