Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC009949.1-201ENST00000623048 1830 ntBASIC18.73■□□□□ 0.59
CCDC66A2RUB6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 KRT18P65-201ENST00000439811 1286 ntBASIC18.73■□□□□ 0.59
CCDC66A2RUB6 DDX43P3-201ENST00000441064 443 ntBASIC18.73■□□□□ 0.59
CCDC66A2RUB6 AC034232.1-201ENST00000506026 1064 ntBASIC18.73■□□□□ 0.59
CCDC66A2RUB6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC66A2RUB6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 LINC01568-207ENST00000641790 1380 ntBASIC18.71■□□□□ 0.59
CCDC66A2RUB6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.71■□□□□ 0.59
CCDC66A2RUB6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 AC024563.2-201ENST00000603282 481 ntBASIC18.71■□□□□ 0.59
CCDC66A2RUB6 AC141257.4-201ENST00000634557 245 ntBASIC18.71■□□□□ 0.59
CCDC66A2RUB6 AC136944.6-201ENST00000634818 245 ntBASIC18.71■□□□□ 0.59
CCDC66A2RUB6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC66A2RUB6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms