Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
PCDHGC4Q9Y5F7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHGC4Q9Y5F7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGC4Q9Y5F7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGC4Q9Y5F7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGC4Q9Y5F7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHGC4Q9Y5F7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGC4Q9Y5F7 KRT18P60-201ENST00000312876 1297 ntBASIC24.48■■□□□ 1.51
PCDHGC4Q9Y5F7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHGC4Q9Y5F7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGC4Q9Y5F7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.48■■□□□ 1.51
PCDHGC4Q9Y5F7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
PCDHGC4Q9Y5F7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGC4Q9Y5F7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGC4Q9Y5F7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHGC4Q9Y5F7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDHGC4Q9Y5F7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGC4Q9Y5F7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
PCDHGC4Q9Y5F7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGC4Q9Y5F7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGC4Q9Y5F7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDHGC4Q9Y5F7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGC4Q9Y5F7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGC4Q9Y5F7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGC4Q9Y5F7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGC4Q9Y5F7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGC4Q9Y5F7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGC4Q9Y5F7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGC4Q9Y5F7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGC4Q9Y5F7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGC4Q9Y5F7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGC4Q9Y5F7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PCDHGC4Q9Y5F7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGC4Q9Y5F7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.45■■□□□ 1.5
PCDHGC4Q9Y5F7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.45■■□□□ 1.5
PCDHGC4Q9Y5F7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.45■■□□□ 1.5
PCDHGC4Q9Y5F7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGC4Q9Y5F7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGC4Q9Y5F7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC4Q9Y5F7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC4Q9Y5F7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC4Q9Y5F7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC4Q9Y5F7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGC4Q9Y5F7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGC4Q9Y5F7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGC4Q9Y5F7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHGC4Q9Y5F7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGC4Q9Y5F7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGC4Q9Y5F7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.42■■□□□ 1.5
PCDHGC4Q9Y5F7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGC4Q9Y5F7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGC4Q9Y5F7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGC4Q9Y5F7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.41■■□□□ 1.5
PCDHGC4Q9Y5F7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PCDHGC4Q9Y5F7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGC4Q9Y5F7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGC4Q9Y5F7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDHGC4Q9Y5F7 ERN1-208ENST00000606895 2068 ntBASIC24.41■■□□□ 1.5
PCDHGC4Q9Y5F7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGC4Q9Y5F7 AC092803.2-201ENST00000564287 1899 ntBASIC24.41■■□□□ 1.5
PCDHGC4Q9Y5F7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGC4Q9Y5F7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
PCDHGC4Q9Y5F7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.4■■□□□ 1.5
PCDHGC4Q9Y5F7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHGC4Q9Y5F7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHGC4Q9Y5F7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGC4Q9Y5F7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGC4Q9Y5F7 SPCS2P3-201ENST00000500401 656 ntBASIC24.39■■□□□ 1.49
PCDHGC4Q9Y5F7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHGC4Q9Y5F7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
PCDHGC4Q9Y5F7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGC4Q9Y5F7 AC129492.7-201ENST00000622992 756 ntBASIC24.39■■□□□ 1.49
PCDHGC4Q9Y5F7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHGC4Q9Y5F7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGC4Q9Y5F7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
PCDHGC4Q9Y5F7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGC4Q9Y5F7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGC4Q9Y5F7 AC091060.1-201ENST00000623524 1766 ntBASIC24.37■■□□□ 1.49
PCDHGC4Q9Y5F7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PCDHGC4Q9Y5F7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PCDHGC4Q9Y5F7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGC4Q9Y5F7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGC4Q9Y5F7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGC4Q9Y5F7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHGC4Q9Y5F7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PCDHGC4Q9Y5F7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHGC4Q9Y5F7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGC4Q9Y5F7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
PCDHGC4Q9Y5F7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGC4Q9Y5F7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGC4Q9Y5F7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGC4Q9Y5F7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHGC4Q9Y5F7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PCDHGC4Q9Y5F7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHGC4Q9Y5F7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGC4Q9Y5F7 DUX4L9-201ENST00000449051 1259 ntBASIC24.35■■□□□ 1.49
PCDHGC4Q9Y5F7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGC4Q9Y5F7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGC4Q9Y5F7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.34■■□□□ 1.49
PCDHGC4Q9Y5F7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms