Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
STAG3Q9UJ98 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
STAG3Q9UJ98 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
STAG3Q9UJ98 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
STAG3Q9UJ98 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
STAG3Q9UJ98 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
STAG3Q9UJ98 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC35.3■■■■□ 3.24
STAG3Q9UJ98 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC35.3■■■■□ 3.24
STAG3Q9UJ98 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
STAG3Q9UJ98 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
STAG3Q9UJ98 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC35.29■■■■□ 3.24
STAG3Q9UJ98 AC022616.5-201ENST00000518796 181 ntBASIC35.29■■■■□ 3.24
STAG3Q9UJ98 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC35.29■■■■□ 3.24
STAG3Q9UJ98 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC35.29■■■■□ 3.24
STAG3Q9UJ98 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
STAG3Q9UJ98 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC35.27■■■■□ 3.24
STAG3Q9UJ98 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
STAG3Q9UJ98 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC35.27■■■■□ 3.24
STAG3Q9UJ98 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC35.26■■■■□ 3.24
STAG3Q9UJ98 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC35.26■■■■□ 3.24
STAG3Q9UJ98 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
STAG3Q9UJ98 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC35.26■■■■□ 3.24
STAG3Q9UJ98 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC35.26■■■■□ 3.23
STAG3Q9UJ98 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC35.25■■■■□ 3.23
STAG3Q9UJ98 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC35.25■■■■□ 3.23
STAG3Q9UJ98 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC35.24■■■■□ 3.23
STAG3Q9UJ98 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC35.24■■■■□ 3.23
STAG3Q9UJ98 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
STAG3Q9UJ98 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC35.24■■■■□ 3.23
STAG3Q9UJ98 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC35.22■■■■□ 3.23
STAG3Q9UJ98 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
STAG3Q9UJ98 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC35.21■■■■□ 3.23
STAG3Q9UJ98 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
STAG3Q9UJ98 TSPY9P-201ENST00000440215 945 ntBASIC35.21■■■■□ 3.23
STAG3Q9UJ98 TSPY11P-201ENST00000442607 1045 ntBASIC35.21■■■■□ 3.23
STAG3Q9UJ98 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
STAG3Q9UJ98 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC35.21■■■■□ 3.23
STAG3Q9UJ98 KRT18P24-201ENST00000344739 1156 ntBASIC35.2■■■■□ 3.23
STAG3Q9UJ98 KRT18P10-201ENST00000388836 1287 ntBASIC35.2■■■■□ 3.23
STAG3Q9UJ98 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC35.2■■■■□ 3.23
STAG3Q9UJ98 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC35.2■■■■□ 3.23
STAG3Q9UJ98 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
STAG3Q9UJ98 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC35.19■■■■□ 3.22
STAG3Q9UJ98 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC35.19■■■■□ 3.22
STAG3Q9UJ98 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC35.19■■■■□ 3.22
STAG3Q9UJ98 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC35.19■■■■□ 3.22
STAG3Q9UJ98 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC35.18■■■■□ 3.22
STAG3Q9UJ98 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC35.18■■■■□ 3.22
STAG3Q9UJ98 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
STAG3Q9UJ98 MIR638-201ENST00000385237 100 ntBASIC35.18■■■■□ 3.22
STAG3Q9UJ98 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC35.18■■■■□ 3.22
STAG3Q9UJ98 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
STAG3Q9UJ98 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
STAG3Q9UJ98 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
STAG3Q9UJ98 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC35.17■■■■□ 3.22
STAG3Q9UJ98 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC35.17■■■■□ 3.22
STAG3Q9UJ98 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC35.16■■■■□ 3.22
STAG3Q9UJ98 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC35.16■■■■□ 3.22
STAG3Q9UJ98 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
STAG3Q9UJ98 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
STAG3Q9UJ98 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC35.14■■■■□ 3.22
STAG3Q9UJ98 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
STAG3Q9UJ98 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC35.14■■■■□ 3.22
STAG3Q9UJ98 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC35.13■■■■□ 3.21
STAG3Q9UJ98 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC35.13■■■■□ 3.21
STAG3Q9UJ98 AC137630.3-201ENST00000607245 391 ntBASIC35.13■■■■□ 3.21
STAG3Q9UJ98 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
STAG3Q9UJ98 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC35.13■■■■□ 3.21
STAG3Q9UJ98 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC35.12■■■■□ 3.21
STAG3Q9UJ98 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC35.12■■■■□ 3.21
STAG3Q9UJ98 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC35.12■■■■□ 3.21
STAG3Q9UJ98 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC35.1■■■■□ 3.21
STAG3Q9UJ98 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC35.1■■■■□ 3.21
STAG3Q9UJ98 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
STAG3Q9UJ98 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC35.1■■■■□ 3.21
STAG3Q9UJ98 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC35.1■■■■□ 3.21
STAG3Q9UJ98 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
STAG3Q9UJ98 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
STAG3Q9UJ98 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
STAG3Q9UJ98 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC35.09■■■■□ 3.21
STAG3Q9UJ98 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
STAG3Q9UJ98 TRIR-202ENST00000588213 841 ntTSL 3 BASIC35.09■■■■□ 3.21
STAG3Q9UJ98 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
STAG3Q9UJ98 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC35.08■■■■□ 3.21
STAG3Q9UJ98 AL139246.5-201ENST00000606645 996 ntBASIC35.08■■■■□ 3.21
STAG3Q9UJ98 RALB-208ENST00000631312 311 ntTSL 5 BASIC35.08■■■■□ 3.21
STAG3Q9UJ98 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC35.08■■■■□ 3.21
STAG3Q9UJ98 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
STAG3Q9UJ98 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
STAG3Q9UJ98 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC35.07■■■■□ 3.2
STAG3Q9UJ98 NALT1-201ENST00000429224 738 ntTSL 5 BASIC35.07■■■■□ 3.2
STAG3Q9UJ98 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC35.07■■■■□ 3.2
STAG3Q9UJ98 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC35.07■■■■□ 3.2
STAG3Q9UJ98 AC021242.3-201ENST00000607598 1377 ntBASIC35.07■■■■□ 3.2
STAG3Q9UJ98 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC35.06■■■■□ 3.2
STAG3Q9UJ98 AC120024.1-201ENST00000562672 995 ntBASIC35.06■■■■□ 3.2
STAG3Q9UJ98 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
STAG3Q9UJ98 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC35.06■■■■□ 3.2
STAG3Q9UJ98 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
STAG3Q9UJ98 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms