Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
GCNT4Q9P109 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.33■■□□□ 1.81
GCNT4Q9P109 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.32■■□□□ 1.8
GCNT4Q9P109 AL157400.5-201ENST00000507624 621 ntBASIC26.32■■□□□ 1.8
GCNT4Q9P109 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GCNT4Q9P109 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GCNT4Q9P109 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.32■■□□□ 1.8
GCNT4Q9P109 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.32■■□□□ 1.8
GCNT4Q9P109 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GCNT4Q9P109 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GCNT4Q9P109 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
GCNT4Q9P109 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GCNT4Q9P109 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
GCNT4Q9P109 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GCNT4Q9P109 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
GCNT4Q9P109 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GCNT4Q9P109 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GCNT4Q9P109 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
GCNT4Q9P109 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
GCNT4Q9P109 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
GCNT4Q9P109 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GCNT4Q9P109 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
GCNT4Q9P109 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
GCNT4Q9P109 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.29■■□□□ 1.8
GCNT4Q9P109 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GCNT4Q9P109 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GCNT4Q9P109 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.28■■□□□ 1.8
GCNT4Q9P109 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GCNT4Q9P109 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GCNT4Q9P109 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.28■■□□□ 1.8
GCNT4Q9P109 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
GCNT4Q9P109 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GCNT4Q9P109 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
GCNT4Q9P109 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
GCNT4Q9P109 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
GCNT4Q9P109 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.27■■□□□ 1.8
GCNT4Q9P109 AC092296.2-201ENST00000589470 999 ntBASIC26.27■■□□□ 1.8
GCNT4Q9P109 AC020928.2-201ENST00000588717 2197 ntBASIC26.27■■□□□ 1.8
GCNT4Q9P109 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.27■■□□□ 1.8
GCNT4Q9P109 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.26■■□□□ 1.79
GCNT4Q9P109 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
GCNT4Q9P109 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
GCNT4Q9P109 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.26■■□□□ 1.79
GCNT4Q9P109 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
GCNT4Q9P109 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.25■■□□□ 1.79
GCNT4Q9P109 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
GCNT4Q9P109 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
GCNT4Q9P109 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
GCNT4Q9P109 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
GCNT4Q9P109 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.25■■□□□ 1.79
GCNT4Q9P109 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
GCNT4Q9P109 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
GCNT4Q9P109 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
GCNT4Q9P109 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
GCNT4Q9P109 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
GCNT4Q9P109 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
GCNT4Q9P109 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
GCNT4Q9P109 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
GCNT4Q9P109 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
GCNT4Q9P109 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.23■■□□□ 1.79
GCNT4Q9P109 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
GCNT4Q9P109 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
GCNT4Q9P109 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
GCNT4Q9P109 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
GCNT4Q9P109 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
GCNT4Q9P109 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
GCNT4Q9P109 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
GCNT4Q9P109 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
GCNT4Q9P109 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.22■■□□□ 1.79
GCNT4Q9P109 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
GCNT4Q9P109 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
GCNT4Q9P109 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.21■■□□□ 1.79
GCNT4Q9P109 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
GCNT4Q9P109 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
GCNT4Q9P109 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
GCNT4Q9P109 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
GCNT4Q9P109 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
GCNT4Q9P109 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.2■■□□□ 1.78
GCNT4Q9P109 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.2■■□□□ 1.78
GCNT4Q9P109 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.2■■□□□ 1.78
GCNT4Q9P109 AC096887.2-201ENST00000623443 1957 ntBASIC26.2■■□□□ 1.78
GCNT4Q9P109 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
GCNT4Q9P109 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
GCNT4Q9P109 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
GCNT4Q9P109 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
GCNT4Q9P109 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.19■■□□□ 1.78
GCNT4Q9P109 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
GCNT4Q9P109 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
GCNT4Q9P109 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
GCNT4Q9P109 AC025884.2-201ENST00000553429 711 ntBASIC26.19■■□□□ 1.78
GCNT4Q9P109 NTF6A-201ENST00000591175 560 ntBASIC26.19■■□□□ 1.78
GCNT4Q9P109 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
GCNT4Q9P109 ECEL1P2-201ENST00000461596 1295 ntBASIC26.18■■□□□ 1.78
GCNT4Q9P109 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
GCNT4Q9P109 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.17■■□□□ 1.78
GCNT4Q9P109 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.17■■□□□ 1.78
GCNT4Q9P109 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.17■■□□□ 1.78
GCNT4Q9P109 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
GCNT4Q9P109 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
GCNT4Q9P109 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms