Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.72■□□□□ 0.91
MSL2Q9HCI7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.72■□□□□ 0.91
MSL2Q9HCI7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSL2Q9HCI7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.72■□□□□ 0.91
MSL2Q9HCI7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSL2Q9HCI7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSL2Q9HCI7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSL2Q9HCI7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
MSL2Q9HCI7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSL2Q9HCI7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.7■□□□□ 0.91
MSL2Q9HCI7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSL2Q9HCI7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.7■□□□□ 0.9
MSL2Q9HCI7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
MSL2Q9HCI7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSL2Q9HCI7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MSL2Q9HCI7 AL592293.1-201ENST00000502889 1188 ntBASIC20.7■□□□□ 0.9
MSL2Q9HCI7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSL2Q9HCI7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSL2Q9HCI7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSL2Q9HCI7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSL2Q9HCI7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MSL2Q9HCI7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSL2Q9HCI7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSL2Q9HCI7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.68■□□□□ 0.9
MSL2Q9HCI7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSL2Q9HCI7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.68■□□□□ 0.9
MSL2Q9HCI7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSL2Q9HCI7 KRT18P60-201ENST00000312876 1297 ntBASIC20.68■□□□□ 0.9
MSL2Q9HCI7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSL2Q9HCI7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSL2Q9HCI7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSL2Q9HCI7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSL2Q9HCI7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.68■□□□□ 0.9
MSL2Q9HCI7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSL2Q9HCI7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSL2Q9HCI7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSL2Q9HCI7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSL2Q9HCI7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.67■□□□□ 0.9
MSL2Q9HCI7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSL2Q9HCI7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSL2Q9HCI7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.67■□□□□ 0.9
MSL2Q9HCI7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.67■□□□□ 0.9
MSL2Q9HCI7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSL2Q9HCI7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSL2Q9HCI7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.67■□□□□ 0.9
MSL2Q9HCI7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.66■□□□□ 0.9
MSL2Q9HCI7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.66■□□□□ 0.9
MSL2Q9HCI7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSL2Q9HCI7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSL2Q9HCI7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MSL2Q9HCI7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.65■□□□□ 0.9
MSL2Q9HCI7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSL2Q9HCI7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
MSL2Q9HCI7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MSL2Q9HCI7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
MSL2Q9HCI7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
MSL2Q9HCI7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MSL2Q9HCI7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSL2Q9HCI7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSL2Q9HCI7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.64■□□□□ 0.89
MSL2Q9HCI7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MSL2Q9HCI7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.64■□□□□ 0.89
MSL2Q9HCI7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MSL2Q9HCI7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MSL2Q9HCI7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSL2Q9HCI7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MSL2Q9HCI7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MSL2Q9HCI7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.63■□□□□ 0.89
MSL2Q9HCI7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSL2Q9HCI7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSL2Q9HCI7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MSL2Q9HCI7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSL2Q9HCI7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSL2Q9HCI7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSL2Q9HCI7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.62■□□□□ 0.89
MSL2Q9HCI7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSL2Q9HCI7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSL2Q9HCI7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSL2Q9HCI7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MSL2Q9HCI7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSL2Q9HCI7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MSL2Q9HCI7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.61■□□□□ 0.89
MSL2Q9HCI7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSL2Q9HCI7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSL2Q9HCI7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSL2Q9HCI7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.61■□□□□ 0.89
MSL2Q9HCI7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
MSL2Q9HCI7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
MSL2Q9HCI7 AC129492.7-201ENST00000622992 756 ntBASIC20.61■□□□□ 0.89
MSL2Q9HCI7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSL2Q9HCI7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSL2Q9HCI7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MSL2Q9HCI7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.6■□□□□ 0.89
MSL2Q9HCI7 AC092803.2-201ENST00000564287 1899 ntBASIC20.6■□□□□ 0.89
MSL2Q9HCI7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MSL2Q9HCI7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.6■□□□□ 0.89
MSL2Q9HCI7 ERN1-208ENST00000606895 2068 ntBASIC20.6■□□□□ 0.89
MSL2Q9HCI7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MSL2Q9HCI7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.59■□□□□ 0.89
MSL2Q9HCI7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms