Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRC40Q9H9A6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LRRC40Q9H9A6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.56■■□□□ 1.52
LRRC40Q9H9A6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.56■■□□□ 1.52
LRRC40Q9H9A6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LRRC40Q9H9A6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.56■■□□□ 1.52
LRRC40Q9H9A6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
LRRC40Q9H9A6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 MIR4449-201ENST00000578365 66 ntBASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
LRRC40Q9H9A6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
LRRC40Q9H9A6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LRRC40Q9H9A6 AC025884.2-201ENST00000553429 711 ntBASIC24.54■■□□□ 1.52
LRRC40Q9H9A6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.54■■□□□ 1.52
LRRC40Q9H9A6 AC092296.2-201ENST00000589470 999 ntBASIC24.54■■□□□ 1.52
LRRC40Q9H9A6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRC40Q9H9A6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRC40Q9H9A6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.53■■□□□ 1.52
LRRC40Q9H9A6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LRRC40Q9H9A6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.53■■□□□ 1.52
LRRC40Q9H9A6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LRRC40Q9H9A6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.53■■□□□ 1.52
LRRC40Q9H9A6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LRRC40Q9H9A6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LRRC40Q9H9A6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.52■■□□□ 1.52
LRRC40Q9H9A6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRC40Q9H9A6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LRRC40Q9H9A6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRC40Q9H9A6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRC40Q9H9A6 AC022413.1-201ENST00000624602 984 ntBASIC24.52■■□□□ 1.52
LRRC40Q9H9A6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRC40Q9H9A6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
LRRC40Q9H9A6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRRC40Q9H9A6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LRRC40Q9H9A6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.51■■□□□ 1.51
LRRC40Q9H9A6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.51■■□□□ 1.51
LRRC40Q9H9A6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
LRRC40Q9H9A6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
LRRC40Q9H9A6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.51■■□□□ 1.51
LRRC40Q9H9A6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRRC40Q9H9A6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
LRRC40Q9H9A6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRRC40Q9H9A6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRRC40Q9H9A6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRRC40Q9H9A6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LRRC40Q9H9A6 MIR3960-201ENST00000583311 91 ntBASIC24.49■■□□□ 1.51
LRRC40Q9H9A6 SMPD5-203ENST00000639008 1464 ntBASIC24.49■■□□□ 1.51
LRRC40Q9H9A6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
LRRC40Q9H9A6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LRRC40Q9H9A6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LRRC40Q9H9A6 ECEL1P2-201ENST00000461596 1295 ntBASIC24.48■■□□□ 1.51
LRRC40Q9H9A6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.48■■□□□ 1.51
LRRC40Q9H9A6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
LRRC40Q9H9A6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
LRRC40Q9H9A6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRRC40Q9H9A6 AC096887.2-201ENST00000623443 1957 ntBASIC24.47■■□□□ 1.51
LRRC40Q9H9A6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.47■■□□□ 1.51
LRRC40Q9H9A6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRRC40Q9H9A6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LRRC40Q9H9A6 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.47■■□□□ 1.51
LRRC40Q9H9A6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.46■■□□□ 1.51
LRRC40Q9H9A6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.46■■□□□ 1.51
LRRC40Q9H9A6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
LRRC40Q9H9A6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.46■■□□□ 1.51
LRRC40Q9H9A6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LRRC40Q9H9A6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.46■■□□□ 1.51
LRRC40Q9H9A6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LRRC40Q9H9A6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.45■■□□□ 1.5
LRRC40Q9H9A6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LRRC40Q9H9A6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LRRC40Q9H9A6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.44■■□□□ 1.5
LRRC40Q9H9A6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.44■■□□□ 1.5
LRRC40Q9H9A6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
LRRC40Q9H9A6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRRC40Q9H9A6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LRRC40Q9H9A6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRRC40Q9H9A6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
LRRC40Q9H9A6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.43■■□□□ 1.5
LRRC40Q9H9A6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.43■■□□□ 1.5
LRRC40Q9H9A6 AC135731.1-201ENST00000569415 2548 ntBASIC24.42■■□□□ 1.5
LRRC40Q9H9A6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRRC40Q9H9A6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRRC40Q9H9A6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
LRRC40Q9H9A6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRRC40Q9H9A6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.42■■□□□ 1.5
LRRC40Q9H9A6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
LRRC40Q9H9A6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LRRC40Q9H9A6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LRRC40Q9H9A6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.41■■□□□ 1.5
LRRC40Q9H9A6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms