Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 MED25-214ENST00000622402 642 ntTSL 5 BASIC35.7■■■■□ 3.31
SCAF1Q9H7N4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC35.69■■■■□ 3.3
SCAF1Q9H7N4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
SCAF1Q9H7N4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC35.69■■■■□ 3.3
SCAF1Q9H7N4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC35.68■■■■□ 3.3
SCAF1Q9H7N4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
SCAF1Q9H7N4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC35.68■■■■□ 3.3
SCAF1Q9H7N4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC35.68■■■■□ 3.3
SCAF1Q9H7N4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC35.68■■■■□ 3.3
SCAF1Q9H7N4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
SCAF1Q9H7N4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC35.68■■■■□ 3.3
SCAF1Q9H7N4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
SCAF1Q9H7N4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC35.66■■■■□ 3.3
SCAF1Q9H7N4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC35.66■■■■□ 3.3
SCAF1Q9H7N4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC35.66■■■■□ 3.3
SCAF1Q9H7N4 PVT1_1.1-201ENST00000615125 194 ntBASIC35.66■■■■□ 3.3
SCAF1Q9H7N4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
SCAF1Q9H7N4 AC026202.3-201ENST00000600805 1127 ntBASIC35.65■■■■□ 3.3
SCAF1Q9H7N4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
SCAF1Q9H7N4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC35.65■■■■□ 3.3
SCAF1Q9H7N4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC35.65■■■■□ 3.3
SCAF1Q9H7N4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
SCAF1Q9H7N4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
SCAF1Q9H7N4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC35.64■■■■□ 3.3
SCAF1Q9H7N4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
SCAF1Q9H7N4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC35.64■■■■□ 3.3
SCAF1Q9H7N4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC35.63■■■■□ 3.29
SCAF1Q9H7N4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC35.63■■■■□ 3.29
SCAF1Q9H7N4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC35.63■■■■□ 3.29
SCAF1Q9H7N4 AC010864.1-201ENST00000609407 1511 ntBASIC35.63■■■■□ 3.29
SCAF1Q9H7N4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC35.63■■■■□ 3.29
SCAF1Q9H7N4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
SCAF1Q9H7N4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC35.62■■■■□ 3.29
SCAF1Q9H7N4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC35.61■■■■□ 3.29
SCAF1Q9H7N4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC35.61■■■■□ 3.29
SCAF1Q9H7N4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
SCAF1Q9H7N4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC35.61■■■■□ 3.29
SCAF1Q9H7N4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
SCAF1Q9H7N4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC35.6■■■■□ 3.29
SCAF1Q9H7N4 AC135983.2-203ENST00000454486 1613 ntBASIC35.6■■■■□ 3.29
SCAF1Q9H7N4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC35.6■■■■□ 3.29
SCAF1Q9H7N4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
SCAF1Q9H7N4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
SCAF1Q9H7N4 SPCS2P3-201ENST00000500401 656 ntBASIC35.59■■■■□ 3.29
SCAF1Q9H7N4 GRAMD4P7-201ENST00000578182 1232 ntBASIC35.59■■■■□ 3.29
SCAF1Q9H7N4 AL031848.2-201ENST00000607670 837 ntBASIC35.59■■■■□ 3.29
SCAF1Q9H7N4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
SCAF1Q9H7N4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC35.59■■■■□ 3.29
SCAF1Q9H7N4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
SCAF1Q9H7N4 AC239859.2-201ENST00000444165 318 ntBASIC35.58■■■■□ 3.29
SCAF1Q9H7N4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC35.58■■■■□ 3.29
SCAF1Q9H7N4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC35.58■■■■□ 3.29
SCAF1Q9H7N4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
SCAF1Q9H7N4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC35.58■■■■□ 3.29
SCAF1Q9H7N4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
SCAF1Q9H7N4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
SCAF1Q9H7N4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC35.58■■■■□ 3.29
SCAF1Q9H7N4 MIR6765-201ENST00000614092 87 ntBASIC35.57■■■■□ 3.29
SCAF1Q9H7N4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC35.57■■■■□ 3.28
SCAF1Q9H7N4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC35.57■■■■□ 3.28
SCAF1Q9H7N4 AC092666.2-201ENST00000613287 246 ntBASIC35.57■■■■□ 3.28
SCAF1Q9H7N4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
SCAF1Q9H7N4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
SCAF1Q9H7N4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC35.56■■■■□ 3.28
SCAF1Q9H7N4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
SCAF1Q9H7N4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC35.56■■■■□ 3.28
SCAF1Q9H7N4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC35.56■■■■□ 3.28
SCAF1Q9H7N4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
SCAF1Q9H7N4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
SCAF1Q9H7N4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC35.56■■■■□ 3.28
SCAF1Q9H7N4 AC020928.2-201ENST00000588717 2197 ntBASIC35.55■■■■□ 3.28
SCAF1Q9H7N4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
SCAF1Q9H7N4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
SCAF1Q9H7N4 SMPD5-203ENST00000639008 1464 ntBASIC35.55■■■■□ 3.28
SCAF1Q9H7N4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
SCAF1Q9H7N4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC35.55■■■■□ 3.28
SCAF1Q9H7N4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
SCAF1Q9H7N4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
SCAF1Q9H7N4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
SCAF1Q9H7N4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
SCAF1Q9H7N4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
SCAF1Q9H7N4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC35.54■■■■□ 3.28
SCAF1Q9H7N4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC35.54■■■■□ 3.28
SCAF1Q9H7N4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC35.53■■■■□ 3.28
SCAF1Q9H7N4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC35.53■■■■□ 3.28
SCAF1Q9H7N4 HYI-210ENST00000486909 905 ntTSL 5 BASIC35.53■■■■□ 3.28
SCAF1Q9H7N4 AC103724.3-201ENST00000564481 992 ntBASIC35.53■■■■□ 3.28
SCAF1Q9H7N4 MIR4508-201ENST00000584178 70 ntBASIC35.53■■■■□ 3.28
SCAF1Q9H7N4 RALB-208ENST00000631312 311 ntTSL 5 BASIC35.53■■■■□ 3.28
SCAF1Q9H7N4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
SCAF1Q9H7N4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
SCAF1Q9H7N4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC35.51■■■■□ 3.28
SCAF1Q9H7N4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
SCAF1Q9H7N4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC35.51■■■■□ 3.27
SCAF1Q9H7N4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC35.51■■■■□ 3.27
SCAF1Q9H7N4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC35.51■■■■□ 3.27
SCAF1Q9H7N4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
SCAF1Q9H7N4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
SCAF1Q9H7N4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
SCAF1Q9H7N4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms