Protein–RNA interactions for Protein: Q9H2B2

SYT4, Synaptotagmin-4, humanhuman

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYT4Q9H2B2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.62■■□□□ 1.05
SYT4Q9H2B2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYT4Q9H2B2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.62■■□□□ 1.05
SYT4Q9H2B2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYT4Q9H2B2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.61■■□□□ 1.05
SYT4Q9H2B2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYT4Q9H2B2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYT4Q9H2B2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYT4Q9H2B2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SYT4Q9H2B2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYT4Q9H2B2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.6■■□□□ 1.05
SYT4Q9H2B2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYT4Q9H2B2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYT4Q9H2B2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYT4Q9H2B2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYT4Q9H2B2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SYT4Q9H2B2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYT4Q9H2B2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYT4Q9H2B2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SYT4Q9H2B2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SYT4Q9H2B2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.59■■□□□ 1.05
SYT4Q9H2B2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYT4Q9H2B2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.58■■□□□ 1.05
SYT4Q9H2B2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.58■■□□□ 1.05
SYT4Q9H2B2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.58■■□□□ 1.05
SYT4Q9H2B2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYT4Q9H2B2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SYT4Q9H2B2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.58■■□□□ 1.05
SYT4Q9H2B2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SYT4Q9H2B2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SYT4Q9H2B2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
SYT4Q9H2B2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SYT4Q9H2B2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYT4Q9H2B2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.56■■□□□ 1.04
SYT4Q9H2B2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYT4Q9H2B2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SYT4Q9H2B2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYT4Q9H2B2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SYT4Q9H2B2 AC096887.2-201ENST00000623443 1957 ntBASIC21.56■■□□□ 1.04
SYT4Q9H2B2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYT4Q9H2B2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYT4Q9H2B2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.55■■□□□ 1.04
SYT4Q9H2B2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.55■■□□□ 1.04
SYT4Q9H2B2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYT4Q9H2B2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYT4Q9H2B2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYT4Q9H2B2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYT4Q9H2B2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SYT4Q9H2B2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYT4Q9H2B2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYT4Q9H2B2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SYT4Q9H2B2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYT4Q9H2B2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYT4Q9H2B2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYT4Q9H2B2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYT4Q9H2B2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
SYT4Q9H2B2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SYT4Q9H2B2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYT4Q9H2B2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYT4Q9H2B2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYT4Q9H2B2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
SYT4Q9H2B2 MIR639-201ENST00000384974 98 ntBASIC21.51■■□□□ 1.03
SYT4Q9H2B2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYT4Q9H2B2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SYT4Q9H2B2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.51■■□□□ 1.03
SYT4Q9H2B2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.51■■□□□ 1.03
SYT4Q9H2B2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SYT4Q9H2B2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYT4Q9H2B2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYT4Q9H2B2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SYT4Q9H2B2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYT4Q9H2B2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.5■■□□□ 1.03
SYT4Q9H2B2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYT4Q9H2B2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYT4Q9H2B2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SYT4Q9H2B2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SYT4Q9H2B2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SYT4Q9H2B2 AL157400.5-201ENST00000507624 621 ntBASIC21.49■■□□□ 1.03
SYT4Q9H2B2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SYT4Q9H2B2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SYT4Q9H2B2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SYT4Q9H2B2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.49■■□□□ 1.03
SYT4Q9H2B2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.48■■□□□ 1.03
SYT4Q9H2B2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.48■■□□□ 1.03
SYT4Q9H2B2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYT4Q9H2B2 AC060814.1-201ENST00000554326 538 ntBASIC21.48■■□□□ 1.03
SYT4Q9H2B2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SYT4Q9H2B2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SYT4Q9H2B2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms