Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 RPS2P35-201ENST00000443417 897 ntBASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 LINC01971-201ENST00000617888 1048 ntBASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.19■□□□□ 0.98
COMMD4Q9H0A8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 AC022211.4-201ENST00000625094 2161 ntBASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD4Q9H0A8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD4Q9H0A8 MIR219A2-201ENST00000608502 1504 ntBASIC21.16■□□□□ 0.98
COMMD4Q9H0A8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.16■□□□□ 0.98
COMMD4Q9H0A8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
COMMD4Q9H0A8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COMMD4Q9H0A8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
COMMD4Q9H0A8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COMMD4Q9H0A8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.15■□□□□ 0.98
COMMD4Q9H0A8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
COMMD4Q9H0A8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COMMD4Q9H0A8 AC096887.2-201ENST00000623443 1957 ntBASIC21.14■□□□□ 0.98
COMMD4Q9H0A8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
COMMD4Q9H0A8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
COMMD4Q9H0A8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD4Q9H0A8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD4Q9H0A8 AC148477.6-201ENST00000623746 465 ntBASIC21.14■□□□□ 0.97
COMMD4Q9H0A8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L13-201ENST00000554103 1267 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L15-201ENST00000611059 1267 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L23-201ENST00000615195 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L24-201ENST00000617576 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L22-201ENST00000618238 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L20-201ENST00000619712 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L21-201ENST00000622058 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L10-201ENST00000622460 1267 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 DUX4L25-201ENST00000624915 1269 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 AC138932.3-201ENST00000567634 1902 ntBASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD4Q9H0A8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.12■□□□□ 0.97
COMMD4Q9H0A8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.12■□□□□ 0.97
COMMD4Q9H0A8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD4Q9H0A8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD4Q9H0A8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
COMMD4Q9H0A8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COMMD4Q9H0A8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 AL359258.2-201ENST00000564063 1566 ntBASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COMMD4Q9H0A8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 AL139125.2-201ENST00000623134 1869 ntBASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
COMMD4Q9H0A8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COMMD4Q9H0A8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
COMMD4Q9H0A8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COMMD4Q9H0A8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COMMD4Q9H0A8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms