Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 AC012676.1-201ENST00000574705 1949 ntBASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LCE3DQ9BYE3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 AC133561.1-201ENST00000568600 2415 ntBASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LCE3DQ9BYE3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
LCE3DQ9BYE3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms