Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHB18PQ96TA0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHB18PQ96TA0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.77■■□□□ 1.72
PCDHB18PQ96TA0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB18PQ96TA0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB18PQ96TA0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB18PQ96TA0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB18PQ96TA0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
PCDHB18PQ96TA0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
PCDHB18PQ96TA0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
PCDHB18PQ96TA0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDHB18PQ96TA0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.76■■□□□ 1.71
PCDHB18PQ96TA0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHB18PQ96TA0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHB18PQ96TA0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHB18PQ96TA0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHB18PQ96TA0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHB18PQ96TA0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDHB18PQ96TA0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
PCDHB18PQ96TA0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDHB18PQ96TA0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHB18PQ96TA0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB18PQ96TA0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB18PQ96TA0 AC025884.2-201ENST00000553429 711 ntBASIC25.74■■□□□ 1.71
PCDHB18PQ96TA0 AC092296.2-201ENST00000589470 999 ntBASIC25.74■■□□□ 1.71
PCDHB18PQ96TA0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.74■■□□□ 1.71
PCDHB18PQ96TA0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHB18PQ96TA0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHB18PQ96TA0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
PCDHB18PQ96TA0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
PCDHB18PQ96TA0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.72■■□□□ 1.71
PCDHB18PQ96TA0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHB18PQ96TA0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB18PQ96TA0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB18PQ96TA0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHB18PQ96TA0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHB18PQ96TA0 MIR4449-201ENST00000578365 66 ntBASIC25.71■■□□□ 1.71
PCDHB18PQ96TA0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB18PQ96TA0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDHB18PQ96TA0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.7■■□□□ 1.7
PCDHB18PQ96TA0 AC135731.1-201ENST00000569415 2548 ntBASIC25.7■■□□□ 1.7
PCDHB18PQ96TA0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHB18PQ96TA0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB18PQ96TA0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB18PQ96TA0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
PCDHB18PQ96TA0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB18PQ96TA0 AC022413.1-201ENST00000624602 984 ntBASIC25.68■■□□□ 1.7
PCDHB18PQ96TA0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.68■■□□□ 1.7
PCDHB18PQ96TA0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.68■■□□□ 1.7
PCDHB18PQ96TA0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB18PQ96TA0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.67■■□□□ 1.7
PCDHB18PQ96TA0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB18PQ96TA0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB18PQ96TA0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHB18PQ96TA0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.66■■□□□ 1.7
PCDHB18PQ96TA0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB18PQ96TA0 SMPD5-203ENST00000639008 1464 ntBASIC25.66■■□□□ 1.7
PCDHB18PQ96TA0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PCDHB18PQ96TA0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PCDHB18PQ96TA0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB18PQ96TA0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
PCDHB18PQ96TA0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB18PQ96TA0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB18PQ96TA0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB18PQ96TA0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.64■■□□□ 1.69
PCDHB18PQ96TA0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
PCDHB18PQ96TA0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB18PQ96TA0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB18PQ96TA0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB18PQ96TA0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.63■■□□□ 1.69
PCDHB18PQ96TA0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
PCDHB18PQ96TA0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDHB18PQ96TA0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB18PQ96TA0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB18PQ96TA0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB18PQ96TA0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB18PQ96TA0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PCDHB18PQ96TA0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHB18PQ96TA0 ECEL1P2-201ENST00000461596 1295 ntBASIC25.62■■□□□ 1.69
PCDHB18PQ96TA0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB18PQ96TA0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB18PQ96TA0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
PCDHB18PQ96TA0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB18PQ96TA0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB18PQ96TA0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
PCDHB18PQ96TA0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
PCDHB18PQ96TA0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
PCDHB18PQ96TA0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB18PQ96TA0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB18PQ96TA0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB18PQ96TA0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB18PQ96TA0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB18PQ96TA0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB18PQ96TA0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB18PQ96TA0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB18PQ96TA0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB18PQ96TA0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB18PQ96TA0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB18PQ96TA0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
PCDHB18PQ96TA0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 1180.5 ms