Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CASD1Q96PB1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CASD1Q96PB1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.24■■□□□ 1.79
CASD1Q96PB1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CASD1Q96PB1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CASD1Q96PB1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CASD1Q96PB1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CASD1Q96PB1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
CASD1Q96PB1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CASD1Q96PB1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CASD1Q96PB1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
CASD1Q96PB1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CASD1Q96PB1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CASD1Q96PB1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.23■■□□□ 1.79
CASD1Q96PB1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.22■■□□□ 1.79
CASD1Q96PB1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.22■■□□□ 1.79
CASD1Q96PB1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.22■■□□□ 1.79
CASD1Q96PB1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CASD1Q96PB1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CASD1Q96PB1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CASD1Q96PB1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.21■■□□□ 1.79
CASD1Q96PB1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CASD1Q96PB1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CASD1Q96PB1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CASD1Q96PB1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CASD1Q96PB1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.19■■□□□ 1.78
CASD1Q96PB1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
CASD1Q96PB1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CASD1Q96PB1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CASD1Q96PB1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.19■■□□□ 1.78
CASD1Q96PB1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CASD1Q96PB1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.18■■□□□ 1.78
CASD1Q96PB1 AL592295.1-201ENST00000400984 884 ntBASIC26.18■■□□□ 1.78
CASD1Q96PB1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CASD1Q96PB1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CASD1Q96PB1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CASD1Q96PB1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CASD1Q96PB1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CASD1Q96PB1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.17■■□□□ 1.78
CASD1Q96PB1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.17■■□□□ 1.78
CASD1Q96PB1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CASD1Q96PB1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
CASD1Q96PB1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.16■■□□□ 1.78
CASD1Q96PB1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CASD1Q96PB1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CASD1Q96PB1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.16■■□□□ 1.78
CASD1Q96PB1 THA1P-201ENST00000590384 1145 ntBASIC26.16■■□□□ 1.78
CASD1Q96PB1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CASD1Q96PB1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CASD1Q96PB1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CASD1Q96PB1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CASD1Q96PB1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CASD1Q96PB1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.15■■□□□ 1.78
CASD1Q96PB1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.15■■□□□ 1.78
CASD1Q96PB1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CASD1Q96PB1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.14■■□□□ 1.78
CASD1Q96PB1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.14■■□□□ 1.78
CASD1Q96PB1 AC131212.1-201ENST00000613771 668 ntBASIC26.14■■□□□ 1.78
CASD1Q96PB1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.14■■□□□ 1.78
CASD1Q96PB1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CASD1Q96PB1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CASD1Q96PB1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CASD1Q96PB1 AC239859.2-201ENST00000444165 318 ntBASIC26.13■■□□□ 1.77
CASD1Q96PB1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.13■■□□□ 1.77
CASD1Q96PB1 BX255925.1-201ENST00000566954 1854 ntBASIC26.13■■□□□ 1.77
CASD1Q96PB1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CASD1Q96PB1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CASD1Q96PB1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CASD1Q96PB1 KRT18P10-201ENST00000388836 1287 ntBASIC26.11■■□□□ 1.77
CASD1Q96PB1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CASD1Q96PB1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CASD1Q96PB1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CASD1Q96PB1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CASD1Q96PB1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
CASD1Q96PB1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CASD1Q96PB1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CASD1Q96PB1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
CASD1Q96PB1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
CASD1Q96PB1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.09■■□□□ 1.77
CASD1Q96PB1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CASD1Q96PB1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CASD1Q96PB1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CASD1Q96PB1 AC142472.1-201ENST00000612013 1741 ntBASIC26.08■■□□□ 1.77
CASD1Q96PB1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.08■■□□□ 1.77
CASD1Q96PB1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.08■■□□□ 1.77
CASD1Q96PB1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CASD1Q96PB1 AL356441.2-201ENST00000443009 864 ntBASIC26.08■■□□□ 1.77
CASD1Q96PB1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.08■■□□□ 1.77
CASD1Q96PB1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CASD1Q96PB1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CASD1Q96PB1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.08■■□□□ 1.76
CASD1Q96PB1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CASD1Q96PB1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CASD1Q96PB1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CASD1Q96PB1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CASD1Q96PB1 Z92544.1-202ENST00000571933 1220 ntBASIC26.07■■□□□ 1.76
CASD1Q96PB1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.07■■□□□ 1.76
CASD1Q96PB1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.06■■□□□ 1.76
CASD1Q96PB1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CASD1Q96PB1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms