Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
NECTIN4Q96NY8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
NECTIN4Q96NY8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
NECTIN4Q96NY8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.43■■□□□ 1.66
NECTIN4Q96NY8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NECTIN4Q96NY8 UNC93B8-201ENST00000511903 705 ntBASIC25.43■■□□□ 1.66
NECTIN4Q96NY8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
NECTIN4Q96NY8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NECTIN4Q96NY8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NECTIN4Q96NY8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.43■■□□□ 1.66
NECTIN4Q96NY8 KRT18P24-201ENST00000344739 1156 ntBASIC25.42■■□□□ 1.66
NECTIN4Q96NY8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
NECTIN4Q96NY8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
NECTIN4Q96NY8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
NECTIN4Q96NY8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
NECTIN4Q96NY8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NECTIN4Q96NY8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
NECTIN4Q96NY8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NECTIN4Q96NY8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
NECTIN4Q96NY8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.4■■□□□ 1.66
NECTIN4Q96NY8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.4■■□□□ 1.66
NECTIN4Q96NY8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
NECTIN4Q96NY8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
NECTIN4Q96NY8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
NECTIN4Q96NY8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.39■■□□□ 1.66
NECTIN4Q96NY8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.39■■□□□ 1.66
NECTIN4Q96NY8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.39■■□□□ 1.66
NECTIN4Q96NY8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.39■■□□□ 1.65
NECTIN4Q96NY8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NECTIN4Q96NY8 MIR638-201ENST00000385237 100 ntBASIC25.38■■□□□ 1.65
NECTIN4Q96NY8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
NECTIN4Q96NY8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.38■■□□□ 1.65
NECTIN4Q96NY8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.38■■□□□ 1.65
NECTIN4Q96NY8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.38■■□□□ 1.65
NECTIN4Q96NY8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.38■■□□□ 1.65
NECTIN4Q96NY8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
NECTIN4Q96NY8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NECTIN4Q96NY8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.37■■□□□ 1.65
NECTIN4Q96NY8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.37■■□□□ 1.65
NECTIN4Q96NY8 AC137630.3-201ENST00000607245 391 ntBASIC25.37■■□□□ 1.65
NECTIN4Q96NY8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.37■■□□□ 1.65
NECTIN4Q96NY8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
NECTIN4Q96NY8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NECTIN4Q96NY8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.35■■□□□ 1.65
NECTIN4Q96NY8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NECTIN4Q96NY8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NECTIN4Q96NY8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.34■■□□□ 1.65
NECTIN4Q96NY8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.34■■□□□ 1.65
NECTIN4Q96NY8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NECTIN4Q96NY8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NECTIN4Q96NY8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
NECTIN4Q96NY8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
NECTIN4Q96NY8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.33■■□□□ 1.65
NECTIN4Q96NY8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
NECTIN4Q96NY8 AL139246.5-201ENST00000606645 996 ntBASIC25.33■■□□□ 1.65
NECTIN4Q96NY8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NECTIN4Q96NY8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.32■■□□□ 1.64
NECTIN4Q96NY8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NECTIN4Q96NY8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
NECTIN4Q96NY8 AC021242.3-201ENST00000607598 1377 ntBASIC25.31■■□□□ 1.64
NECTIN4Q96NY8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.31■■□□□ 1.64
NECTIN4Q96NY8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.31■■□□□ 1.64
NECTIN4Q96NY8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.31■■□□□ 1.64
NECTIN4Q96NY8 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.31■■□□□ 1.64
NECTIN4Q96NY8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NECTIN4Q96NY8 TSPY9P-201ENST00000440215 945 ntBASIC25.3■■□□□ 1.64
NECTIN4Q96NY8 TSPY11P-201ENST00000442607 1045 ntBASIC25.3■■□□□ 1.64
NECTIN4Q96NY8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NECTIN4Q96NY8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NECTIN4Q96NY8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NECTIN4Q96NY8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.29■■□□□ 1.64
NECTIN4Q96NY8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NECTIN4Q96NY8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.29■■□□□ 1.64
NECTIN4Q96NY8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.29■■□□□ 1.64
NECTIN4Q96NY8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NECTIN4Q96NY8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.29■■□□□ 1.64
NECTIN4Q96NY8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.29■■□□□ 1.64
NECTIN4Q96NY8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NECTIN4Q96NY8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NECTIN4Q96NY8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.28■■□□□ 1.64
NECTIN4Q96NY8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
NECTIN4Q96NY8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NECTIN4Q96NY8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.27■■□□□ 1.64
NECTIN4Q96NY8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.27■■□□□ 1.64
NECTIN4Q96NY8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NECTIN4Q96NY8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.26■■□□□ 1.63
NECTIN4Q96NY8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
NECTIN4Q96NY8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NECTIN4Q96NY8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
NECTIN4Q96NY8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NECTIN4Q96NY8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.26■■□□□ 1.63
NECTIN4Q96NY8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.25■■□□□ 1.63
NECTIN4Q96NY8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NECTIN4Q96NY8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NECTIN4Q96NY8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NECTIN4Q96NY8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NECTIN4Q96NY8 AC120024.1-201ENST00000562672 995 ntBASIC25.24■■□□□ 1.63
NECTIN4Q96NY8 AC092028.1-203ENST00000608262 953 ntBASIC25.24■■□□□ 1.63
NECTIN4Q96NY8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.23■■□□□ 1.63
NECTIN4Q96NY8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms