Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PHACTR3Q96KR7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC32.07■■■□□ 2.72
PHACTR3Q96KR7 AC018755.3-202ENST00000596210 929 ntBASIC32.07■■■□□ 2.72
PHACTR3Q96KR7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC32.07■■■□□ 2.72
PHACTR3Q96KR7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PHACTR3Q96KR7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PHACTR3Q96KR7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
PHACTR3Q96KR7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PHACTR3Q96KR7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PHACTR3Q96KR7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
PHACTR3Q96KR7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PHACTR3Q96KR7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
PHACTR3Q96KR7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.04■■■□□ 2.72
PHACTR3Q96KR7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PHACTR3Q96KR7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
PHACTR3Q96KR7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC32.03■■■□□ 2.72
PHACTR3Q96KR7 PVT1_1.1-201ENST00000615125 194 ntBASIC32.03■■■□□ 2.72
PHACTR3Q96KR7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PHACTR3Q96KR7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
PHACTR3Q96KR7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC32.02■■■□□ 2.72
PHACTR3Q96KR7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PHACTR3Q96KR7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
PHACTR3Q96KR7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC32.02■■■□□ 2.72
PHACTR3Q96KR7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC32.02■■■□□ 2.72
PHACTR3Q96KR7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PHACTR3Q96KR7 RARRES2P1-201ENST00000474487 481 ntBASIC32.02■■■□□ 2.72
PHACTR3Q96KR7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC32.01■■■□□ 2.72
PHACTR3Q96KR7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
PHACTR3Q96KR7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC32.01■■■□□ 2.71
PHACTR3Q96KR7 AC010980.1-201ENST00000587192 1142 ntBASIC32.01■■■□□ 2.71
PHACTR3Q96KR7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PHACTR3Q96KR7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC32■■■□□ 2.71
PHACTR3Q96KR7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC32■■■□□ 2.71
PHACTR3Q96KR7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC32■■■□□ 2.71
PHACTR3Q96KR7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
PHACTR3Q96KR7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC32■■■□□ 2.71
PHACTR3Q96KR7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.99■■■□□ 2.71
PHACTR3Q96KR7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.99■■■□□ 2.71
PHACTR3Q96KR7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
PHACTR3Q96KR7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
PHACTR3Q96KR7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.99■■■□□ 2.71
PHACTR3Q96KR7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.98■■■□□ 2.71
PHACTR3Q96KR7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PHACTR3Q96KR7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PHACTR3Q96KR7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PHACTR3Q96KR7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PHACTR3Q96KR7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.97■■■□□ 2.71
PHACTR3Q96KR7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
PHACTR3Q96KR7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
PHACTR3Q96KR7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PHACTR3Q96KR7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PHACTR3Q96KR7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
PHACTR3Q96KR7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.96■■■□□ 2.71
PHACTR3Q96KR7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.96■■■□□ 2.71
PHACTR3Q96KR7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PHACTR3Q96KR7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
PHACTR3Q96KR7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
PHACTR3Q96KR7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PHACTR3Q96KR7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
PHACTR3Q96KR7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
PHACTR3Q96KR7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PHACTR3Q96KR7 BHLHE23-202ENST00000612929 1109 ntBASIC31.94■■■□□ 2.7
PHACTR3Q96KR7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
PHACTR3Q96KR7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
PHACTR3Q96KR7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
PHACTR3Q96KR7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PHACTR3Q96KR7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PHACTR3Q96KR7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
PHACTR3Q96KR7 AL121749.1-202ENST00000609313 2153 ntBASIC31.93■■■□□ 2.7
PHACTR3Q96KR7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
PHACTR3Q96KR7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
PHACTR3Q96KR7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PHACTR3Q96KR7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PHACTR3Q96KR7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.92■■■□□ 2.7
PHACTR3Q96KR7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.92■■■□□ 2.7
PHACTR3Q96KR7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.92■■■□□ 2.7
PHACTR3Q96KR7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.92■■■□□ 2.7
PHACTR3Q96KR7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
PHACTR3Q96KR7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
PHACTR3Q96KR7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.9■■■□□ 2.7
PHACTR3Q96KR7 AC103834.1-201ENST00000520383 144 ntBASIC31.9■■■□□ 2.7
PHACTR3Q96KR7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.9■■■□□ 2.7
PHACTR3Q96KR7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PHACTR3Q96KR7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
PHACTR3Q96KR7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PHACTR3Q96KR7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PHACTR3Q96KR7 AC139795.1-202ENST00000500444 432 ntBASIC31.89■■■□□ 2.7
PHACTR3Q96KR7 AC087393.1-201ENST00000582896 145 ntBASIC31.89■■■□□ 2.7
PHACTR3Q96KR7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.89■■■□□ 2.7
PHACTR3Q96KR7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PHACTR3Q96KR7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PHACTR3Q96KR7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
PHACTR3Q96KR7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.88■■■□□ 2.69
PHACTR3Q96KR7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PHACTR3Q96KR7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.88■■■□□ 2.69
PHACTR3Q96KR7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PHACTR3Q96KR7 RPS2P7-201ENST00000447334 885 ntBASIC31.87■■■□□ 2.69
PHACTR3Q96KR7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
PHACTR3Q96KR7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
PHACTR3Q96KR7 AC074183.2-201ENST00000623112 922 ntBASIC31.86■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms