Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMD4Q96H15 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMD4Q96H15 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TIMD4Q96H15 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
TIMD4Q96H15 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.33■□□□□ 0.85
TIMD4Q96H15 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TIMD4Q96H15 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.33■□□□□ 0.85
TIMD4Q96H15 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.33■□□□□ 0.85
TIMD4Q96H15 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.33■□□□□ 0.85
TIMD4Q96H15 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TIMD4Q96H15 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TIMD4Q96H15 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TIMD4Q96H15 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TIMD4Q96H15 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TIMD4Q96H15 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TIMD4Q96H15 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.32■□□□□ 0.84
TIMD4Q96H15 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TIMD4Q96H15 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TIMD4Q96H15 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
TIMD4Q96H15 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TIMD4Q96H15 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TIMD4Q96H15 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TIMD4Q96H15 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TIMD4Q96H15 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.3■□□□□ 0.84
TIMD4Q96H15 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMD4Q96H15 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMD4Q96H15 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMD4Q96H15 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TIMD4Q96H15 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TIMD4Q96H15 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMD4Q96H15 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMD4Q96H15 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMD4Q96H15 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMD4Q96H15 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TIMD4Q96H15 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TIMD4Q96H15 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TIMD4Q96H15 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TIMD4Q96H15 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.29■□□□□ 0.84
TIMD4Q96H15 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TIMD4Q96H15 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TIMD4Q96H15 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TIMD4Q96H15 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TIMD4Q96H15 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.28■□□□□ 0.84
TIMD4Q96H15 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMD4Q96H15 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMD4Q96H15 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
TIMD4Q96H15 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TIMD4Q96H15 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.26■□□□□ 0.83
TIMD4Q96H15 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TIMD4Q96H15 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TIMD4Q96H15 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TIMD4Q96H15 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TIMD4Q96H15 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TIMD4Q96H15 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TIMD4Q96H15 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TIMD4Q96H15 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TIMD4Q96H15 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.25■□□□□ 0.83
TIMD4Q96H15 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TIMD4Q96H15 AC010980.1-201ENST00000587192 1142 ntBASIC20.25■□□□□ 0.83
TIMD4Q96H15 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TIMD4Q96H15 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
TIMD4Q96H15 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.24■□□□□ 0.83
TIMD4Q96H15 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TIMD4Q96H15 YBX1P4-201ENST00000392794 808 ntBASIC20.24■□□□□ 0.83
TIMD4Q96H15 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.24■□□□□ 0.83
TIMD4Q96H15 RARRES2P1-201ENST00000474487 481 ntBASIC20.24■□□□□ 0.83
TIMD4Q96H15 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TIMD4Q96H15 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.24■□□□□ 0.83
TIMD4Q96H15 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.24■□□□□ 0.83
TIMD4Q96H15 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.24■□□□□ 0.83
TIMD4Q96H15 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TIMD4Q96H15 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TIMD4Q96H15 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.23■□□□□ 0.83
TIMD4Q96H15 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TIMD4Q96H15 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
TIMD4Q96H15 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TIMD4Q96H15 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
TIMD4Q96H15 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TIMD4Q96H15 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TIMD4Q96H15 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TIMD4Q96H15 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TIMD4Q96H15 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TIMD4Q96H15 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.22■□□□□ 0.83
TIMD4Q96H15 AC087393.1-201ENST00000582896 145 ntBASIC20.22■□□□□ 0.83
TIMD4Q96H15 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TIMD4Q96H15 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMD4Q96H15 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.21■□□□□ 0.83
TIMD4Q96H15 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.21■□□□□ 0.83
TIMD4Q96H15 RPS2P7-201ENST00000447334 885 ntBASIC20.21■□□□□ 0.83
TIMD4Q96H15 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMD4Q96H15 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMD4Q96H15 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TIMD4Q96H15 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
TIMD4Q96H15 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.2■□□□□ 0.82
TIMD4Q96H15 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TIMD4Q96H15 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TIMD4Q96H15 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TIMD4Q96H15 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TIMD4Q96H15 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.2■□□□□ 0.82
TIMD4Q96H15 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms