Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HMGCLL1Q8TB92 AC025884.2-201ENST00000553429 711 ntBASIC23.8■■□□□ 1.4
HMGCLL1Q8TB92 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HMGCLL1Q8TB92 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.8■■□□□ 1.4
HMGCLL1Q8TB92 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMGCLL1Q8TB92 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMGCLL1Q8TB92 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
HMGCLL1Q8TB92 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMGCLL1Q8TB92 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
HMGCLL1Q8TB92 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMGCLL1Q8TB92 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HMGCLL1Q8TB92 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HMGCLL1Q8TB92 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HMGCLL1Q8TB92 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HMGCLL1Q8TB92 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HMGCLL1Q8TB92 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.77■■□□□ 1.4
HMGCLL1Q8TB92 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.77■■□□□ 1.4
HMGCLL1Q8TB92 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.77■■□□□ 1.4
HMGCLL1Q8TB92 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLL1Q8TB92 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
HMGCLL1Q8TB92 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
HMGCLL1Q8TB92 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLL1Q8TB92 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.76■■□□□ 1.39
HMGCLL1Q8TB92 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.76■■□□□ 1.39
HMGCLL1Q8TB92 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.76■■□□□ 1.39
HMGCLL1Q8TB92 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLL1Q8TB92 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMGCLL1Q8TB92 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMGCLL1Q8TB92 SMPD5-203ENST00000639008 1464 ntBASIC23.75■■□□□ 1.39
HMGCLL1Q8TB92 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HMGCLL1Q8TB92 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMGCLL1Q8TB92 RARRES2P2-201ENST00000394842 485 ntBASIC23.75■■□□□ 1.39
HMGCLL1Q8TB92 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.75■■□□□ 1.39
HMGCLL1Q8TB92 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.75■■□□□ 1.39
HMGCLL1Q8TB92 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HMGCLL1Q8TB92 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.74■■□□□ 1.39
HMGCLL1Q8TB92 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.74■■□□□ 1.39
HMGCLL1Q8TB92 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.74■■□□□ 1.39
HMGCLL1Q8TB92 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.74■■□□□ 1.39
HMGCLL1Q8TB92 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HMGCLL1Q8TB92 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
HMGCLL1Q8TB92 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HMGCLL1Q8TB92 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HMGCLL1Q8TB92 AC093323.1-202ENST00000635031 2045 ntBASIC23.73■■□□□ 1.39
HMGCLL1Q8TB92 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.73■■□□□ 1.39
HMGCLL1Q8TB92 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
HMGCLL1Q8TB92 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HMGCLL1Q8TB92 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HMGCLL1Q8TB92 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.72■■□□□ 1.39
HMGCLL1Q8TB92 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.72■■□□□ 1.39
HMGCLL1Q8TB92 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
HMGCLL1Q8TB92 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HMGCLL1Q8TB92 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HMGCLL1Q8TB92 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HMGCLL1Q8TB92 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.71■■□□□ 1.39
HMGCLL1Q8TB92 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HMGCLL1Q8TB92 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
HMGCLL1Q8TB92 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.7■■□□□ 1.38
HMGCLL1Q8TB92 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
HMGCLL1Q8TB92 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HMGCLL1Q8TB92 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HMGCLL1Q8TB92 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HMGCLL1Q8TB92 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
HMGCLL1Q8TB92 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HMGCLL1Q8TB92 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HMGCLL1Q8TB92 MIR3960-201ENST00000583311 91 ntBASIC23.69■■□□□ 1.38
HMGCLL1Q8TB92 AC007029.1-201ENST00000604183 313 ntBASIC23.69■■□□□ 1.38
HMGCLL1Q8TB92 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.69■■□□□ 1.38
HMGCLL1Q8TB92 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HMGCLL1Q8TB92 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HMGCLL1Q8TB92 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
HMGCLL1Q8TB92 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
HMGCLL1Q8TB92 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
HMGCLL1Q8TB92 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
HMGCLL1Q8TB92 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
HMGCLL1Q8TB92 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
HMGCLL1Q8TB92 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HMGCLL1Q8TB92 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HMGCLL1Q8TB92 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
HMGCLL1Q8TB92 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.67■■□□□ 1.38
HMGCLL1Q8TB92 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
HMGCLL1Q8TB92 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.66■■□□□ 1.38
HMGCLL1Q8TB92 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HMGCLL1Q8TB92 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HMGCLL1Q8TB92 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HMGCLL1Q8TB92 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HMGCLL1Q8TB92 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms