Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PHC3Q8NDX5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.03■■□□□ 1.44
PHC3Q8NDX5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.03■■□□□ 1.44
PHC3Q8NDX5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PHC3Q8NDX5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PHC3Q8NDX5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PHC3Q8NDX5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PHC3Q8NDX5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PHC3Q8NDX5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PHC3Q8NDX5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.02■■□□□ 1.44
PHC3Q8NDX5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PHC3Q8NDX5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.02■■□□□ 1.44
PHC3Q8NDX5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PHC3Q8NDX5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PHC3Q8NDX5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PHC3Q8NDX5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
PHC3Q8NDX5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.01■■□□□ 1.43
PHC3Q8NDX5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.01■■□□□ 1.43
PHC3Q8NDX5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
PHC3Q8NDX5 SMPD5-203ENST00000639008 1464 ntBASIC24■■□□□ 1.43
PHC3Q8NDX5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PHC3Q8NDX5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24■■□□□ 1.43
PHC3Q8NDX5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PHC3Q8NDX5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24■■□□□ 1.43
PHC3Q8NDX5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24■■□□□ 1.43
PHC3Q8NDX5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PHC3Q8NDX5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PHC3Q8NDX5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PHC3Q8NDX5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PHC3Q8NDX5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
PHC3Q8NDX5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PHC3Q8NDX5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PHC3Q8NDX5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PHC3Q8NDX5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.98■■□□□ 1.43
PHC3Q8NDX5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
PHC3Q8NDX5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PHC3Q8NDX5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PHC3Q8NDX5 AP004609.3-201ENST00000610705 1884 ntBASIC23.98■■□□□ 1.43
PHC3Q8NDX5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PHC3Q8NDX5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PHC3Q8NDX5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.97■■□□□ 1.43
PHC3Q8NDX5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PHC3Q8NDX5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.97■■□□□ 1.43
PHC3Q8NDX5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PHC3Q8NDX5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
PHC3Q8NDX5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.96■■□□□ 1.43
PHC3Q8NDX5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PHC3Q8NDX5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.96■■□□□ 1.43
PHC3Q8NDX5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PHC3Q8NDX5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
PHC3Q8NDX5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.95■■□□□ 1.42
PHC3Q8NDX5 AC025884.2-201ENST00000553429 711 ntBASIC23.95■■□□□ 1.42
PHC3Q8NDX5 AC091060.1-201ENST00000623524 1766 ntBASIC23.95■■□□□ 1.42
PHC3Q8NDX5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.94■■□□□ 1.42
PHC3Q8NDX5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
PHC3Q8NDX5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
PHC3Q8NDX5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PHC3Q8NDX5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PHC3Q8NDX5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PHC3Q8NDX5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.93■■□□□ 1.42
PHC3Q8NDX5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
PHC3Q8NDX5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PHC3Q8NDX5 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.92■■□□□ 1.42
PHC3Q8NDX5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PHC3Q8NDX5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PHC3Q8NDX5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.92■■□□□ 1.42
PHC3Q8NDX5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.92■■□□□ 1.42
PHC3Q8NDX5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.92■■□□□ 1.42
PHC3Q8NDX5 AC142472.1-201ENST00000612013 1741 ntBASIC23.92■■□□□ 1.42
PHC3Q8NDX5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PHC3Q8NDX5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PHC3Q8NDX5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
PHC3Q8NDX5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PHC3Q8NDX5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.91■■□□□ 1.42
PHC3Q8NDX5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PHC3Q8NDX5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.91■■□□□ 1.42
PHC3Q8NDX5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PHC3Q8NDX5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PHC3Q8NDX5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PHC3Q8NDX5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.9■■□□□ 1.42
PHC3Q8NDX5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
PHC3Q8NDX5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PHC3Q8NDX5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PHC3Q8NDX5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PHC3Q8NDX5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PHC3Q8NDX5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PHC3Q8NDX5 AC007029.1-201ENST00000604183 313 ntBASIC23.89■■□□□ 1.41
PHC3Q8NDX5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PHC3Q8NDX5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PHC3Q8NDX5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PHC3Q8NDX5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PHC3Q8NDX5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PHC3Q8NDX5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.88■■□□□ 1.41
PHC3Q8NDX5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
PHC3Q8NDX5 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
PHC3Q8NDX5 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PHC3Q8NDX5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PHC3Q8NDX5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.87■■□□□ 1.41
PHC3Q8NDX5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.87■■□□□ 1.41
PHC3Q8NDX5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms