Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
EFCAB3Q8N7B9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
EFCAB3Q8N7B9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.73■■□□□ 1.39
EFCAB3Q8N7B9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.73■■□□□ 1.39
EFCAB3Q8N7B9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
EFCAB3Q8N7B9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
EFCAB3Q8N7B9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
EFCAB3Q8N7B9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
EFCAB3Q8N7B9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.71■■□□□ 1.39
EFCAB3Q8N7B9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
EFCAB3Q8N7B9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
EFCAB3Q8N7B9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
EFCAB3Q8N7B9 AC022413.1-201ENST00000624602 984 ntBASIC23.71■■□□□ 1.39
EFCAB3Q8N7B9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
EFCAB3Q8N7B9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
EFCAB3Q8N7B9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
EFCAB3Q8N7B9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
EFCAB3Q8N7B9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
EFCAB3Q8N7B9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
EFCAB3Q8N7B9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
EFCAB3Q8N7B9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
EFCAB3Q8N7B9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
EFCAB3Q8N7B9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
EFCAB3Q8N7B9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
EFCAB3Q8N7B9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.69■■□□□ 1.38
EFCAB3Q8N7B9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.68■■□□□ 1.38
EFCAB3Q8N7B9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
EFCAB3Q8N7B9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
EFCAB3Q8N7B9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
EFCAB3Q8N7B9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
EFCAB3Q8N7B9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
EFCAB3Q8N7B9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.67■■□□□ 1.38
EFCAB3Q8N7B9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
EFCAB3Q8N7B9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.67■■□□□ 1.38
EFCAB3Q8N7B9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
EFCAB3Q8N7B9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
EFCAB3Q8N7B9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.67■■□□□ 1.38
EFCAB3Q8N7B9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
EFCAB3Q8N7B9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.66■■□□□ 1.38
EFCAB3Q8N7B9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
EFCAB3Q8N7B9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
EFCAB3Q8N7B9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.66■■□□□ 1.38
EFCAB3Q8N7B9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
EFCAB3Q8N7B9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
EFCAB3Q8N7B9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
EFCAB3Q8N7B9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
EFCAB3Q8N7B9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.65■■□□□ 1.38
EFCAB3Q8N7B9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
EFCAB3Q8N7B9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
EFCAB3Q8N7B9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
EFCAB3Q8N7B9 ERN1-208ENST00000606895 2068 ntBASIC23.64■■□□□ 1.38
EFCAB3Q8N7B9 MIR219A2-201ENST00000608502 1504 ntBASIC23.64■■□□□ 1.38
EFCAB3Q8N7B9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.64■■□□□ 1.38
EFCAB3Q8N7B9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.64■■□□□ 1.37
EFCAB3Q8N7B9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.64■■□□□ 1.37
EFCAB3Q8N7B9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
EFCAB3Q8N7B9 AC148477.6-201ENST00000623746 465 ntBASIC23.63■■□□□ 1.37
EFCAB3Q8N7B9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
EFCAB3Q8N7B9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
EFCAB3Q8N7B9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
EFCAB3Q8N7B9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.62■■□□□ 1.37
EFCAB3Q8N7B9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
EFCAB3Q8N7B9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
EFCAB3Q8N7B9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.61■■□□□ 1.37
EFCAB3Q8N7B9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
EFCAB3Q8N7B9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
EFCAB3Q8N7B9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
EFCAB3Q8N7B9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
EFCAB3Q8N7B9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
EFCAB3Q8N7B9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
EFCAB3Q8N7B9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
EFCAB3Q8N7B9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
EFCAB3Q8N7B9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
EFCAB3Q8N7B9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
EFCAB3Q8N7B9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
EFCAB3Q8N7B9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
EFCAB3Q8N7B9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.59■■□□□ 1.37
EFCAB3Q8N7B9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
EFCAB3Q8N7B9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
EFCAB3Q8N7B9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
EFCAB3Q8N7B9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
EFCAB3Q8N7B9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
EFCAB3Q8N7B9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
EFCAB3Q8N7B9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
EFCAB3Q8N7B9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.58■■□□□ 1.36
EFCAB3Q8N7B9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
EFCAB3Q8N7B9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
EFCAB3Q8N7B9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
EFCAB3Q8N7B9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
EFCAB3Q8N7B9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
EFCAB3Q8N7B9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
EFCAB3Q8N7B9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
EFCAB3Q8N7B9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
EFCAB3Q8N7B9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
EFCAB3Q8N7B9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.56■■□□□ 1.36
EFCAB3Q8N7B9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
EFCAB3Q8N7B9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
EFCAB3Q8N7B9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
EFCAB3Q8N7B9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
EFCAB3Q8N7B9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms