Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LRRTM4Q86VH4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LRRTM4Q86VH4 SPCS2P3-201ENST00000500401 656 ntBASIC23.84■■□□□ 1.41
LRRTM4Q86VH4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRRTM4Q86VH4 AL033527.3-201ENST00000566366 1196 ntBASIC23.84■■□□□ 1.41
LRRTM4Q86VH4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.84■■□□□ 1.41
LRRTM4Q86VH4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
LRRTM4Q86VH4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRRTM4Q86VH4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRRTM4Q86VH4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRRTM4Q86VH4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
LRRTM4Q86VH4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.83■■□□□ 1.4
LRRTM4Q86VH4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRTM4Q86VH4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRTM4Q86VH4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRTM4Q86VH4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.82■■□□□ 1.4
LRRTM4Q86VH4 AC018755.3-202ENST00000596210 929 ntBASIC23.82■■□□□ 1.4
LRRTM4Q86VH4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRTM4Q86VH4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRTM4Q86VH4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRRTM4Q86VH4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRTM4Q86VH4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.8■■□□□ 1.4
LRRTM4Q86VH4 DUX4L18-201ENST00000553347 1267 ntBASIC23.8■■□□□ 1.4
LRRTM4Q86VH4 MIR6765-201ENST00000614092 87 ntBASIC23.8■■□□□ 1.4
LRRTM4Q86VH4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRTM4Q86VH4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRTM4Q86VH4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.79■■□□□ 1.4
LRRTM4Q86VH4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.79■■□□□ 1.4
LRRTM4Q86VH4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.79■■□□□ 1.4
LRRTM4Q86VH4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRTM4Q86VH4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM4Q86VH4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRTM4Q86VH4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.78■■□□□ 1.4
LRRTM4Q86VH4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.78■■□□□ 1.4
LRRTM4Q86VH4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.77■■□□□ 1.4
LRRTM4Q86VH4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRTM4Q86VH4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
LRRTM4Q86VH4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LRRTM4Q86VH4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
LRRTM4Q86VH4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRTM4Q86VH4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
LRRTM4Q86VH4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.76■■□□□ 1.39
LRRTM4Q86VH4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRTM4Q86VH4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LRRTM4Q86VH4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRTM4Q86VH4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRTM4Q86VH4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.74■■□□□ 1.39
LRRTM4Q86VH4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
LRRTM4Q86VH4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRTM4Q86VH4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRTM4Q86VH4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRTM4Q86VH4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRTM4Q86VH4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRTM4Q86VH4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.73■■□□□ 1.39
LRRTM4Q86VH4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.73■■□□□ 1.39
LRRTM4Q86VH4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.73■■□□□ 1.39
LRRTM4Q86VH4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRTM4Q86VH4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRRTM4Q86VH4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.73■■□□□ 1.39
LRRTM4Q86VH4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
LRRTM4Q86VH4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRTM4Q86VH4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
LRRTM4Q86VH4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRTM4Q86VH4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.72■■□□□ 1.39
LRRTM4Q86VH4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LRRTM4Q86VH4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRTM4Q86VH4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.72■■□□□ 1.39
LRRTM4Q86VH4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.72■■□□□ 1.39
LRRTM4Q86VH4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.72■■□□□ 1.39
LRRTM4Q86VH4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM4Q86VH4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM4Q86VH4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM4Q86VH4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM4Q86VH4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRTM4Q86VH4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRTM4Q86VH4 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.7■■□□□ 1.38
LRRTM4Q86VH4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.7■■□□□ 1.38
LRRTM4Q86VH4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.7■■□□□ 1.38
LRRTM4Q86VH4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
LRRTM4Q86VH4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.7■■□□□ 1.38
LRRTM4Q86VH4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LRRTM4Q86VH4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
LRRTM4Q86VH4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.69■■□□□ 1.38
LRRTM4Q86VH4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.69■■□□□ 1.38
LRRTM4Q86VH4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.69■■□□□ 1.38
LRRTM4Q86VH4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM4Q86VH4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms