Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.23■□□□□ 0.99
HIST2H3AQ71DI3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.23■□□□□ 0.99
HIST2H3AQ71DI3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H3AQ71DI3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HIST2H3AQ71DI3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H3AQ71DI3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H3AQ71DI3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H3AQ71DI3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H3AQ71DI3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.22■□□□□ 0.99
HIST2H3AQ71DI3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.22■□□□□ 0.99
HIST2H3AQ71DI3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H3AQ71DI3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H3AQ71DI3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.21■□□□□ 0.99
HIST2H3AQ71DI3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.21■□□□□ 0.99
HIST2H3AQ71DI3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.2■□□□□ 0.98
HIST2H3AQ71DI3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST2H3AQ71DI3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST2H3AQ71DI3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HIST2H3AQ71DI3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HIST2H3AQ71DI3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HIST2H3AQ71DI3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.19■□□□□ 0.98
HIST2H3AQ71DI3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H3AQ71DI3 ECEL1P2-201ENST00000461596 1295 ntBASIC21.19■□□□□ 0.98
HIST2H3AQ71DI3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HIST2H3AQ71DI3 AC022413.1-201ENST00000624602 984 ntBASIC21.19■□□□□ 0.98
HIST2H3AQ71DI3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H3AQ71DI3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H3AQ71DI3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H3AQ71DI3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.19■□□□□ 0.98
HIST2H3AQ71DI3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H3AQ71DI3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HIST2H3AQ71DI3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.18■□□□□ 0.98
HIST2H3AQ71DI3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HIST2H3AQ71DI3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HIST2H3AQ71DI3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIST2H3AQ71DI3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIST2H3AQ71DI3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.18■□□□□ 0.98
HIST2H3AQ71DI3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HIST2H3AQ71DI3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HIST2H3AQ71DI3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H3AQ71DI3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H3AQ71DI3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.17■□□□□ 0.98
HIST2H3AQ71DI3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.17■□□□□ 0.98
HIST2H3AQ71DI3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.17■□□□□ 0.98
HIST2H3AQ71DI3 SMPD5-203ENST00000639008 1464 ntBASIC21.17■□□□□ 0.98
HIST2H3AQ71DI3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.17■□□□□ 0.98
HIST2H3AQ71DI3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H3AQ71DI3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H3AQ71DI3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H3AQ71DI3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HIST2H3AQ71DI3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H3AQ71DI3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HIST2H3AQ71DI3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H3AQ71DI3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H3AQ71DI3 MIR3960-201ENST00000583311 91 ntBASIC21.15■□□□□ 0.98
HIST2H3AQ71DI3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H3AQ71DI3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HIST2H3AQ71DI3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H3AQ71DI3 AC096887.2-201ENST00000623443 1957 ntBASIC21.14■□□□□ 0.98
HIST2H3AQ71DI3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.14■□□□□ 0.97
HIST2H3AQ71DI3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST2H3AQ71DI3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.14■□□□□ 0.97
HIST2H3AQ71DI3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST2H3AQ71DI3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H3AQ71DI3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H3AQ71DI3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.13■□□□□ 0.97
HIST2H3AQ71DI3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H3AQ71DI3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.13■□□□□ 0.97
HIST2H3AQ71DI3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.13■□□□□ 0.97
HIST2H3AQ71DI3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.13■□□□□ 0.97
HIST2H3AQ71DI3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.13■□□□□ 0.97
HIST2H3AQ71DI3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H3AQ71DI3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H3AQ71DI3 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.12■□□□□ 0.97
HIST2H3AQ71DI3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H3AQ71DI3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.12■□□□□ 0.97
HIST2H3AQ71DI3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.12■□□□□ 0.97
HIST2H3AQ71DI3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H3AQ71DI3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HIST2H3AQ71DI3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST2H3AQ71DI3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HIST2H3AQ71DI3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST2H3AQ71DI3 AC020928.2-201ENST00000588717 2197 ntBASIC21.11■□□□□ 0.97
HIST2H3AQ71DI3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST2H3AQ71DI3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
HIST2H3AQ71DI3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H3AQ71DI3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H3AQ71DI3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H3AQ71DI3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.09■□□□□ 0.97
HIST2H3AQ71DI3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HIST2H3AQ71DI3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H3AQ71DI3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H3AQ71DI3 GPX1-201ENST00000419349 1106 ntBASIC21.09■□□□□ 0.97
HIST2H3AQ71DI3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.09■□□□□ 0.97
HIST2H3AQ71DI3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.09■□□□□ 0.97
HIST2H3AQ71DI3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H3AQ71DI3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.09■□□□□ 0.97
HIST2H3AQ71DI3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H3AQ71DI3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST2H3AQ71DI3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms