Protein–RNA interactions for Protein: Q6PIZ9

TRAT1, T-cell receptor-associated transmembrane adapter 1, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAT1Q6PIZ9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAT1Q6PIZ9 AC020928.2-201ENST00000588717 2197 ntBASIC20.04■□□□□ 0.8
TRAT1Q6PIZ9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.04■□□□□ 0.8
TRAT1Q6PIZ9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAT1Q6PIZ9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAT1Q6PIZ9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAT1Q6PIZ9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAT1Q6PIZ9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAT1Q6PIZ9 MIR639-201ENST00000384974 98 ntBASIC20.03■□□□□ 0.8
TRAT1Q6PIZ9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAT1Q6PIZ9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAT1Q6PIZ9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAT1Q6PIZ9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAT1Q6PIZ9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAT1Q6PIZ9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAT1Q6PIZ9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAT1Q6PIZ9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAT1Q6PIZ9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.01■□□□□ 0.79
TRAT1Q6PIZ9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAT1Q6PIZ9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAT1Q6PIZ9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.01■□□□□ 0.79
TRAT1Q6PIZ9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.01■□□□□ 0.79
TRAT1Q6PIZ9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAT1Q6PIZ9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TRAT1Q6PIZ9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAT1Q6PIZ9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRAT1Q6PIZ9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20■□□□□ 0.79
TRAT1Q6PIZ9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAT1Q6PIZ9 AC060814.1-201ENST00000554326 538 ntBASIC19.99■□□□□ 0.79
TRAT1Q6PIZ9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAT1Q6PIZ9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAT1Q6PIZ9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAT1Q6PIZ9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAT1Q6PIZ9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRAT1Q6PIZ9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAT1Q6PIZ9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAT1Q6PIZ9 MIR3960-201ENST00000583311 91 ntBASIC19.98■□□□□ 0.79
TRAT1Q6PIZ9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAT1Q6PIZ9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRAT1Q6PIZ9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRAT1Q6PIZ9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 AL157400.5-201ENST00000507624 621 ntBASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAT1Q6PIZ9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAT1Q6PIZ9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAT1Q6PIZ9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAT1Q6PIZ9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAT1Q6PIZ9 AC025884.2-201ENST00000553429 711 ntBASIC19.96■□□□□ 0.79
TRAT1Q6PIZ9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAT1Q6PIZ9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAT1Q6PIZ9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAT1Q6PIZ9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
TRAT1Q6PIZ9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRAT1Q6PIZ9 AC096887.2-201ENST00000623443 1957 ntBASIC19.95■□□□□ 0.78
TRAT1Q6PIZ9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAT1Q6PIZ9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAT1Q6PIZ9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAT1Q6PIZ9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAT1Q6PIZ9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAT1Q6PIZ9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAT1Q6PIZ9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAT1Q6PIZ9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAT1Q6PIZ9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRAT1Q6PIZ9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAT1Q6PIZ9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAT1Q6PIZ9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAT1Q6PIZ9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAT1Q6PIZ9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRAT1Q6PIZ9 SMPD5-203ENST00000639008 1464 ntBASIC19.92■□□□□ 0.78
TRAT1Q6PIZ9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRAT1Q6PIZ9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRAT1Q6PIZ9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAT1Q6PIZ9 AC092296.2-201ENST00000589470 999 ntBASIC19.92■□□□□ 0.78
TRAT1Q6PIZ9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAT1Q6PIZ9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAT1Q6PIZ9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAT1Q6PIZ9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAT1Q6PIZ9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRAT1Q6PIZ9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms