Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDPF1Q6NVV7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDPF1Q6NVV7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDPF1Q6NVV7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDPF1Q6NVV7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CDPF1Q6NVV7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDPF1Q6NVV7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDPF1Q6NVV7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CDPF1Q6NVV7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDPF1Q6NVV7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDPF1Q6NVV7 ABCB10P4-201ENST00000566803 2184 ntBASIC18.26■□□□□ 0.51
CDPF1Q6NVV7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDPF1Q6NVV7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDPF1Q6NVV7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDPF1Q6NVV7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDPF1Q6NVV7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDPF1Q6NVV7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDPF1Q6NVV7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDPF1Q6NVV7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDPF1Q6NVV7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDPF1Q6NVV7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDPF1Q6NVV7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDPF1Q6NVV7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDPF1Q6NVV7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CDPF1Q6NVV7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.25■□□□□ 0.51
CDPF1Q6NVV7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDPF1Q6NVV7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDPF1Q6NVV7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDPF1Q6NVV7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDPF1Q6NVV7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDPF1Q6NVV7 AC138932.3-201ENST00000567634 1902 ntBASIC18.24■□□□□ 0.51
CDPF1Q6NVV7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDPF1Q6NVV7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDPF1Q6NVV7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.24■□□□□ 0.51
CDPF1Q6NVV7 AL391121.1-201ENST00000607967 1349 ntBASIC18.23■□□□□ 0.51
CDPF1Q6NVV7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CDPF1Q6NVV7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.23■□□□□ 0.51
CDPF1Q6NVV7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.23■□□□□ 0.51
CDPF1Q6NVV7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
CDPF1Q6NVV7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDPF1Q6NVV7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDPF1Q6NVV7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDPF1Q6NVV7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDPF1Q6NVV7 CAHM-201ENST00000604200 896 ntBASIC18.22■□□□□ 0.51
CDPF1Q6NVV7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDPF1Q6NVV7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDPF1Q6NVV7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.22■□□□□ 0.51
CDPF1Q6NVV7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDPF1Q6NVV7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDPF1Q6NVV7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.21■□□□□ 0.51
CDPF1Q6NVV7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.21■□□□□ 0.51
CDPF1Q6NVV7 AL133380.1-201ENST00000506013 324 ntBASIC18.21■□□□□ 0.51
CDPF1Q6NVV7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDPF1Q6NVV7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CDPF1Q6NVV7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDPF1Q6NVV7 EP400NL-214ENST00000641289 2402 ntBASIC18.21■□□□□ 0.51
CDPF1Q6NVV7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDPF1Q6NVV7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
CDPF1Q6NVV7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDPF1Q6NVV7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDPF1Q6NVV7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDPF1Q6NVV7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDPF1Q6NVV7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.2■□□□□ 0.5
CDPF1Q6NVV7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDPF1Q6NVV7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDPF1Q6NVV7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDPF1Q6NVV7 AL117328.2-201ENST00000624617 1940 ntBASIC18.19■□□□□ 0.5
CDPF1Q6NVV7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDPF1Q6NVV7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDPF1Q6NVV7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDPF1Q6NVV7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDPF1Q6NVV7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
CDPF1Q6NVV7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDPF1Q6NVV7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.18■□□□□ 0.5
CDPF1Q6NVV7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDPF1Q6NVV7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDPF1Q6NVV7 DUSP8P5-201ENST00000422884 1815 ntBASIC18.18■□□□□ 0.5
CDPF1Q6NVV7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.18■□□□□ 0.5
CDPF1Q6NVV7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDPF1Q6NVV7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.18■□□□□ 0.5
CDPF1Q6NVV7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDPF1Q6NVV7 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.17■□□□□ 0.5
CDPF1Q6NVV7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDPF1Q6NVV7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDPF1Q6NVV7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDPF1Q6NVV7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.17■□□□□ 0.5
CDPF1Q6NVV7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDPF1Q6NVV7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDPF1Q6NVV7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDPF1Q6NVV7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDPF1Q6NVV7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDPF1Q6NVV7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDPF1Q6NVV7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDPF1Q6NVV7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDPF1Q6NVV7 AC007375.3-201ENST00000600936 2314 ntBASIC18.16■□□□□ 0.5
CDPF1Q6NVV7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDPF1Q6NVV7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDPF1Q6NVV7 AL162393.1-201ENST00000437852 946 ntBASIC18.16■□□□□ 0.5
CDPF1Q6NVV7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CDPF1Q6NVV7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms