Protein–RNA interactions for Protein: P82970

HMGN5, High mobility group nucleosome-binding domain-containing protein 5, humanhuman

Known RBP Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN5P82970 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.25■■■□□ 2.11
HMGN5P82970 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.25■■■□□ 2.11
HMGN5P82970 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.24■■■□□ 2.11
HMGN5P82970 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
HMGN5P82970 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
HMGN5P82970 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
HMGN5P82970 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.24■■■□□ 2.11
HMGN5P82970 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
HMGN5P82970 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
HMGN5P82970 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.24■■■□□ 2.11
HMGN5P82970 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 MIR639-201ENST00000384974 98 ntBASIC28.23■■■□□ 2.11
HMGN5P82970 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC28.23■■■□□ 2.11
HMGN5P82970 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HMGN5P82970 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC28.22■■■□□ 2.11
HMGN5P82970 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
HMGN5P82970 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
HMGN5P82970 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.22■■■□□ 2.11
HMGN5P82970 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
HMGN5P82970 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
HMGN5P82970 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC28.21■■■□□ 2.11
HMGN5P82970 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
HMGN5P82970 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
HMGN5P82970 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.2■■■□□ 2.1
HMGN5P82970 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
HMGN5P82970 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HMGN5P82970 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
HMGN5P82970 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.19■■■□□ 2.1
HMGN5P82970 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
HMGN5P82970 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
HMGN5P82970 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
HMGN5P82970 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
HMGN5P82970 AL157400.5-201ENST00000507624 621 ntBASIC28.17■■■□□ 2.1
HMGN5P82970 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
HMGN5P82970 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
HMGN5P82970 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
HMGN5P82970 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
HMGN5P82970 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HMGN5P82970 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC28.16■■■□□ 2.1
HMGN5P82970 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
HMGN5P82970 AC060814.1-201ENST00000554326 538 ntBASIC28.16■■■□□ 2.1
HMGN5P82970 AC096887.2-201ENST00000623443 1957 ntBASIC28.16■■■□□ 2.1
HMGN5P82970 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.15■■■□□ 2.1
HMGN5P82970 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
HMGN5P82970 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HMGN5P82970 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HMGN5P82970 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.15■■■□□ 2.1
HMGN5P82970 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
HMGN5P82970 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
HMGN5P82970 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
HMGN5P82970 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HMGN5P82970 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.14■■■□□ 2.1
HMGN5P82970 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HMGN5P82970 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HMGN5P82970 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.14■■■□□ 2.09
HMGN5P82970 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HMGN5P82970 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.13■■■□□ 2.09
HMGN5P82970 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC28.13■■■□□ 2.09
HMGN5P82970 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.12■■■□□ 2.09
HMGN5P82970 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HMGN5P82970 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.12■■■□□ 2.09
HMGN5P82970 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.12■■■□□ 2.09
HMGN5P82970 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HMGN5P82970 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HMGN5P82970 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HMGN5P82970 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.11■■■□□ 2.09
HMGN5P82970 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
HMGN5P82970 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
HMGN5P82970 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
HMGN5P82970 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.11■■■□□ 2.09
HMGN5P82970 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.11■■■□□ 2.09
HMGN5P82970 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
HMGN5P82970 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
HMGN5P82970 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.1■■■□□ 2.09
HMGN5P82970 AC025884.2-201ENST00000553429 711 ntBASIC28.1■■■□□ 2.09
HMGN5P82970 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.1■■■□□ 2.09
HMGN5P82970 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.09■■■□□ 2.09
HMGN5P82970 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.09■■■□□ 2.09
HMGN5P82970 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
HMGN5P82970 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.09■■■□□ 2.09
HMGN5P82970 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.09■■■□□ 2.09
HMGN5P82970 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.09■■■□□ 2.09
HMGN5P82970 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
HMGN5P82970 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
HMGN5P82970 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.08■■■□□ 2.09
HMGN5P82970 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.08■■■□□ 2.09
HMGN5P82970 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.08■■■□□ 2.09
HMGN5P82970 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms