Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
GABREP78334 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
GABREP78334 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GABREP78334 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GABREP78334 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.21■■□□□ 1.31
GABREP78334 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GABREP78334 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.21■■□□□ 1.31
GABREP78334 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.21■■□□□ 1.31
GABREP78334 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GABREP78334 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
GABREP78334 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.2■■□□□ 1.3
GABREP78334 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GABREP78334 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GABREP78334 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
GABREP78334 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GABREP78334 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
GABREP78334 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
GABREP78334 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GABREP78334 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
GABREP78334 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
GABREP78334 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.19■■□□□ 1.3
GABREP78334 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
GABREP78334 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GABREP78334 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.18■■□□□ 1.3
GABREP78334 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GABREP78334 BX664725.1-201ENST00000438252 379 ntBASIC23.18■■□□□ 1.3
GABREP78334 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.18■■□□□ 1.3
GABREP78334 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
GABREP78334 MIR4787-201ENST00000607364 84 ntBASIC23.18■■□□□ 1.3
GABREP78334 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GABREP78334 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.18■■□□□ 1.3
GABREP78334 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
GABREP78334 AC139426.1-201ENST00000568218 2529 ntBASIC23.17■■□□□ 1.3
GABREP78334 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GABREP78334 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
GABREP78334 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
GABREP78334 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
GABREP78334 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.17■■□□□ 1.3
GABREP78334 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
GABREP78334 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.16■■□□□ 1.3
GABREP78334 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
GABREP78334 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.16■■□□□ 1.3
GABREP78334 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
GABREP78334 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GABREP78334 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GABREP78334 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GABREP78334 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GABREP78334 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.15■■□□□ 1.3
GABREP78334 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
GABREP78334 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
GABREP78334 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
GABREP78334 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
GABREP78334 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
GABREP78334 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
GABREP78334 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.14■■□□□ 1.29
GABREP78334 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.14■■□□□ 1.29
GABREP78334 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.14■■□□□ 1.29
GABREP78334 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.14■■□□□ 1.29
GABREP78334 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
GABREP78334 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
GABREP78334 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
GABREP78334 KRT16P3-201ENST00000439127 1283 ntBASIC23.12■■□□□ 1.29
GABREP78334 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
GABREP78334 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
GABREP78334 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.11■■□□□ 1.29
GABREP78334 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.11■■□□□ 1.29
GABREP78334 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
GABREP78334 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GABREP78334 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.11■■□□□ 1.29
GABREP78334 UNC93B8-201ENST00000511903 705 ntBASIC23.11■■□□□ 1.29
GABREP78334 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
GABREP78334 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GABREP78334 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
GABREP78334 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GABREP78334 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
GABREP78334 AC022616.5-201ENST00000518796 181 ntBASIC23.1■■□□□ 1.29
GABREP78334 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GABREP78334 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
GABREP78334 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GABREP78334 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
GABREP78334 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
GABREP78334 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.09■■□□□ 1.29
GABREP78334 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
GABREP78334 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
GABREP78334 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.08■■□□□ 1.29
GABREP78334 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
GABREP78334 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.08■■□□□ 1.29
GABREP78334 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.08■■□□□ 1.29
GABREP78334 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
GABREP78334 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.08■■□□□ 1.28
GABREP78334 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
GABREP78334 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
GABREP78334 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.07■■□□□ 1.28
GABREP78334 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.07■■□□□ 1.28
GABREP78334 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
GABREP78334 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
GABREP78334 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
GABREP78334 KRT18P10-201ENST00000388836 1287 ntBASIC23.06■■□□□ 1.28
GABREP78334 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.06■■□□□ 1.28
GABREP78334 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms