Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD40P25942 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD40P25942 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD40P25942 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.95■□□□□ 0.94
CD40P25942 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD40P25942 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD40P25942 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.95■□□□□ 0.94
CD40P25942 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD40P25942 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.94■□□□□ 0.94
CD40P25942 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD40P25942 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD40P25942 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CD40P25942 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD40P25942 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD40P25942 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD40P25942 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD40P25942 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD40P25942 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.93■□□□□ 0.94
CD40P25942 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CD40P25942 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD40P25942 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD40P25942 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
CD40P25942 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.93■□□□□ 0.94
CD40P25942 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
CD40P25942 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD40P25942 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD40P25942 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD40P25942 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.92■□□□□ 0.94
CD40P25942 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.92■□□□□ 0.94
CD40P25942 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD40P25942 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD40P25942 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD40P25942 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD40P25942 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD40P25942 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.92■□□□□ 0.94
CD40P25942 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD40P25942 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.91■□□□□ 0.94
CD40P25942 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD40P25942 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.91■□□□□ 0.94
CD40P25942 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD40P25942 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD40P25942 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD40P25942 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.9■□□□□ 0.94
CD40P25942 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD40P25942 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.9■□□□□ 0.94
CD40P25942 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD40P25942 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.9■□□□□ 0.94
CD40P25942 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD40P25942 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD40P25942 KRT18P10-201ENST00000388836 1287 ntBASIC20.89■□□□□ 0.93
CD40P25942 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.89■□□□□ 0.93
CD40P25942 AC087393.1-201ENST00000582896 145 ntBASIC20.89■□□□□ 0.93
CD40P25942 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD40P25942 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD40P25942 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD40P25942 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD40P25942 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD40P25942 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.88■□□□□ 0.93
CD40P25942 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD40P25942 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD40P25942 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD40P25942 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD40P25942 RPS2P7-201ENST00000447334 885 ntBASIC20.88■□□□□ 0.93
CD40P25942 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.88■□□□□ 0.93
CD40P25942 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD40P25942 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
CD40P25942 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD40P25942 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD40P25942 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD40P25942 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
CD40P25942 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD40P25942 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD40P25942 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD40P25942 PVT1_1.1-201ENST00000615125 194 ntBASIC20.87■□□□□ 0.93
CD40P25942 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.87■□□□□ 0.93
CD40P25942 KRT8P33-201ENST00000508125 1423 ntBASIC20.87■□□□□ 0.93
CD40P25942 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD40P25942 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD40P25942 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.86■□□□□ 0.93
CD40P25942 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD40P25942 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD40P25942 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.85■□□□□ 0.93
CD40P25942 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD40P25942 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CD40P25942 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD40P25942 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.84■□□□□ 0.93
CD40P25942 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD40P25942 YBX1P4-201ENST00000392794 808 ntBASIC20.84■□□□□ 0.93
CD40P25942 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.84■□□□□ 0.93
CD40P25942 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.84■□□□□ 0.93
CD40P25942 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD40P25942 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD40P25942 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD40P25942 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD40P25942 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.83■□□□□ 0.93
CD40P25942 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD40P25942 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD40P25942 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CD40P25942 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD40P25942 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms