Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SP9P0CG40 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.46■■□□□ 1.51
SP9P0CG40 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.46■■□□□ 1.51
SP9P0CG40 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SP9P0CG40 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SP9P0CG40 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SP9P0CG40 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SP9P0CG40 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SP9P0CG40 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.45■■□□□ 1.5
SP9P0CG40 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
SP9P0CG40 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.44■■□□□ 1.5
SP9P0CG40 AP002414.2-202ENST00000590929 1450 ntBASIC24.44■■□□□ 1.5
SP9P0CG40 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SP9P0CG40 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SP9P0CG40 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
SP9P0CG40 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SP9P0CG40 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SP9P0CG40 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.43■■□□□ 1.5
SP9P0CG40 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.43■■□□□ 1.5
SP9P0CG40 AC092028.1-203ENST00000608262 953 ntBASIC24.43■■□□□ 1.5
SP9P0CG40 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SP9P0CG40 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
SP9P0CG40 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.42■■□□□ 1.5
SP9P0CG40 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
SP9P0CG40 AC096631.2-201ENST00000436136 790 ntBASIC24.41■■□□□ 1.5
SP9P0CG40 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.41■■□□□ 1.5
SP9P0CG40 ST7-AS1-201ENST00000456775 1889 ntBASIC24.41■■□□□ 1.5
SP9P0CG40 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SP9P0CG40 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SP9P0CG40 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
SP9P0CG40 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.4■■□□□ 1.5
SP9P0CG40 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.4■■□□□ 1.5
SP9P0CG40 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.4■■□□□ 1.5
SP9P0CG40 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SP9P0CG40 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SP9P0CG40 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SP9P0CG40 AL117332.1-201ENST00000622628 974 ntBASIC24.39■■□□□ 1.49
SP9P0CG40 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SP9P0CG40 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SP9P0CG40 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.38■■□□□ 1.49
SP9P0CG40 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
SP9P0CG40 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SP9P0CG40 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SP9P0CG40 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.38■■□□□ 1.49
SP9P0CG40 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.38■■□□□ 1.49
SP9P0CG40 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.38■■□□□ 1.49
SP9P0CG40 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SP9P0CG40 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SP9P0CG40 WHAMMP3-201ENST00000611636 1609 ntBASIC24.37■■□□□ 1.49
SP9P0CG40 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
SP9P0CG40 AC133561.4-201ENST00000566112 224 ntBASIC24.37■■□□□ 1.49
SP9P0CG40 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.37■■□□□ 1.49
SP9P0CG40 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SP9P0CG40 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SP9P0CG40 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SP9P0CG40 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
SP9P0CG40 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.37■■□□□ 1.49
SP9P0CG40 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SP9P0CG40 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.36■■□□□ 1.49
SP9P0CG40 RARRES2P6-201ENST00000567333 442 ntBASIC24.36■■□□□ 1.49
SP9P0CG40 MIR3621-201ENST00000580529 85 ntBASIC24.36■■□□□ 1.49
SP9P0CG40 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.36■■□□□ 1.49
SP9P0CG40 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.36■■□□□ 1.49
SP9P0CG40 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.35■■□□□ 1.49
SP9P0CG40 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SP9P0CG40 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.35■■□□□ 1.49
SP9P0CG40 AC120024.1-201ENST00000562672 995 ntBASIC24.35■■□□□ 1.49
SP9P0CG40 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SP9P0CG40 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SP9P0CG40 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SP9P0CG40 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SP9P0CG40 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SP9P0CG40 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.34■■□□□ 1.49
SP9P0CG40 KRT18P10-201ENST00000388836 1287 ntBASIC24.33■■□□□ 1.49
SP9P0CG40 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.33■■□□□ 1.49
SP9P0CG40 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.33■■□□□ 1.49
SP9P0CG40 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.33■■□□□ 1.49
SP9P0CG40 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
SP9P0CG40 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.33■■□□□ 1.49
SP9P0CG40 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SP9P0CG40 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SP9P0CG40 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SP9P0CG40 ABCB10P3-201ENST00000561950 2166 ntBASIC24.32■■□□□ 1.48
SP9P0CG40 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SP9P0CG40 AC010997.5-201ENST00000609182 354 ntBASIC24.31■■□□□ 1.48
SP9P0CG40 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.3■■□□□ 1.48
SP9P0CG40 ZNRF2P3-201ENST00000424200 374 ntBASIC24.3■■□□□ 1.48
SP9P0CG40 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SP9P0CG40 MIR4466-201ENST00000606121 54 ntBASIC24.3■■□□□ 1.48
SP9P0CG40 MIR6724-1-201ENST00000616420 92 ntBASIC24.3■■□□□ 1.48
SP9P0CG40 MIR6724-2-201ENST00000616483 92 ntBASIC24.3■■□□□ 1.48
SP9P0CG40 MIR6724-4-201ENST00000617390 92 ntBASIC24.3■■□□□ 1.48
SP9P0CG40 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SP9P0CG40 MIR6724-3-201ENST00000622482 92 ntBASIC24.3■■□□□ 1.48
SP9P0CG40 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SP9P0CG40 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SP9P0CG40 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
SP9P0CG40 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.29■■□□□ 1.48
SP9P0CG40 AL356740.2-201ENST00000601559 647 ntBASIC24.29■■□□□ 1.48
SP9P0CG40 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms